当前解析结果
SmilChr05G000738| 统一新 Gene ID | SmilChr05G000738 |
|---|---|
| 名称 | SmilChr05G000738 |
| 描述 | double-strand break repair protein MRE11-like |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 5627362 - 5628136 / - |
| NCBI Gene ID | LOC130985450 |
|---|---|
| GeneID | 130985450 |
| locus_tag | - |
| NCBI Name | LOC130985450 |
| 原始查询 | SmilChr05G000738 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | double-strand break repair protein MRE11-like |
| 产物 | double-strand break repair protein MRE11-like |
| Arabidopsis | AT5G54260 (MRE11)DNA repair and meiosis protein (Mre11) [Source:NCBI gene (formerly Entrezgene);Acc:835514] identity=81.8; qcov=0.948; evalue=1.5e-57; confidence=high |
| Rice | Os04g0635900 (MRE11)- identity=74.5; qcov=0.914; evalue=3.33e-50; confidence=medium |
| GO | GO:0000723 (telomere maintenance); GO:0000724 (double-strand break repair via homologous recombination); GO:0004519 (endonuclease activity); GO:0005634 (nucleus); GO:0006303 (double-strand break repair via nonhomologous end joining); GO:0007095 (mitotic G2 DNA damage checkpoint signaling); GO:0030145 (manganese ion binding); GO:0030870 (Mre11 complex); GO:0042138 (meiotic DNA double-strand break formation); GO:0097552 (mitochondrial double-strand break repair via homologous recombination) |
| KEGG | - |
| Pfam | PF04152 (Mre11_DNA_bind) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130985450 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057764419.1 |
| 2 | Nucleoplasm | 核质 | 1.00000 | XP_057764419.1 |
| 3 | Nuclear body | 核内小体 | 0.60000 | XP_057764419.1 |
| 4 | Cytosol | 细胞质基质 | 0.60000 | XP_057764419.1 |
| 5 | Cytoplasm | 细胞质 | 0.40000 | XP_057764419.1 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057764419.1PF04152
Mre11_DNA_bind 37-105 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057764419.1 |
Pfam | PF04152 |
Mre11_DNA_bind | Domain | 37 | 105 | 6.7e-14 | 53.1 | Mre11 DNA-binding presumed domain |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。