当前解析结果
SmilChr05G000887| 统一新 Gene ID | SmilChr05G000887 |
|---|---|
| 名称 | SmilChr05G000887 |
| 描述 | uncharacterized SmilChr05G000887 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 7014534 - 7015857 / + |
| NCBI Gene ID | LOC130985601 |
|---|---|
| GeneID | 130985601 |
| locus_tag | - |
| NCBI Name | LOC130985601 |
| 原始查询 | SmilChr05G000887 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:828235]; symbol=AT4G21500; hit=AT4G21500; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:828235]; symbol=AT4G21500; hit=AT4G21500; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G21500 (AT4G21500)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:828235] identity=37.3; qcov=1.07; evalue=1.64e-21; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130985601 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 0.80000 | XP_057764648.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 0.40000 | XP_057764648.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057764648.1 |
| 4 | Nucleus membrane | 核膜 | 0.20000 | XP_057764648.1 |
| 5 | Cytoplasm | 细胞质 | 0.20000 | XP_057764648.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:7015055 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B82,B87,C22,D9 |
Chr5:7015122 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B121,B4,B54 |
Chr5:7015145 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B3,C83 |
Chr5:7015213 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C13 |
Chr5:7015218 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C73,D6 |
Chr5:7015345 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B134,C5,D7 |
Chr5:7015486 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B99,C52,C6 |
Chr5:7015492 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B16,B50 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。