当前解析结果
SmilChr05G001108| 统一新 Gene ID | SmilChr05G001108 |
|---|---|
| 名称 | SmilChr05G001108 |
| 描述 | uncharacterized SmilChr05G001108 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 9200626 - 9203544 / + |
| NCBI Gene ID | LOC130985814 |
|---|---|
| GeneID | 130985814 |
| locus_tag | - |
| NCBI Name | LOC130985814 |
| 原始查询 | SmilChr05G001108 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Arabidopsis/Rice homolog |
|---|---|
| 描述 | B-cell receptor-associated 31-like protein [Source:NCBI gene (formerly Entrezgene);Acc:834264]; symbol=AT5G42570; hit=AT5G42570; species=arabidopsis; confidence=high |
| 产物 | B-cell receptor-associated 31-like protein [Source:NCBI gene (formerly Entrezgene);Acc:834264]; symbol=AT5G42570; hit=AT5G42570; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G42570 (AT5G42570)B-cell receptor-associated 31-like protein [Source:NCBI gene (formerly Entrezgene);Acc:834264] identity=58.6; qcov=1; evalue=1.5e-90; confidence=high |
| Rice | Os05g0272900- identity=49; qcov=0.901; evalue=1.02e-68; confidence=high |
| GO | GO:0005783 (endoplasmic reticulum); GO:0005789 (endoplasmic reticulum membrane); GO:0006886 (intracellular protein transport); GO:0006888 (endoplasmic reticulum to Golgi vesicle-mediated transport); GO:0070973 (protein localization to endoplasmic reticulum exit site) |
| KEGG | smil04141 (Protein processing in endoplasmic reticulum - Salvia miltiorrhiza (redroot sage)) |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130985814 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057764936.1 |
| 2 | Nucleus membrane | 核膜 | 0.80000 | XP_057764936.1 |
| 3 | Nucleus inner membrane | Nucleus inner membrane | 0.60000 | XP_057764936.1 |
| 4 | Endoplasmic reticulum membrane | 内质网膜 | 0.60000 | XP_057764936.1 |
| 5 | Nucleus | 细胞核 | 0.20000 | XP_057764936.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:9200991 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr5:9201147 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B104,C5,D8 |
Chr5:9203005 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B19,B42,B43,B62,C45 |
Chr5:9203262 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B104,C5,D8 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。