当前解析结果
SmilChr05G001168| 统一新 Gene ID | SmilChr05G001168 |
|---|---|
| 名称 | SmilChr05G001168 |
| 描述 | uncharacterized SmilChr05G001168 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 9796933 - 9798019 / - |
| NCBI Gene ID | LOC131025498 |
|---|---|
| GeneID | 131025498 |
| locus_tag | - |
| NCBI Name | LOC131025498 |
| 原始查询 | SmilChr05G001168 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | DUF1685 family protein [Source:NCBI gene (formerly Entrezgene);Acc:818876]; symbol=AT2G42760; hit=AT2G42760; species=arabidopsis; confidence=low |
| 产物 | DUF1685 family protein [Source:NCBI gene (formerly Entrezgene);Acc:818876]; symbol=AT2G42760; hit=AT2G42760; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G42760 (AT2G42760)DUF1685 family protein [Source:NCBI gene (formerly Entrezgene);Acc:818876] identity=36; qcov=0.958; evalue=1.42e-11; confidence=low |
| Rice | Os06g0550800- identity=31.9; qcov=0.972; evalue=9.75e-09; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131025498 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057811276.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057811276.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057811276.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057811276.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057811276.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:9796937 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr5:9796943 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C73,D6 |
Chr5:9796945 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B68 |
Chr5:9796946 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A13,C46 |
Chr5:9796949 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B55 |
Chr5:9796950 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C73,D6 |
Chr5:9796972 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A10,B140 |
Chr5:9797030 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B5,B58,B74,C13 |
Chr5:9797086 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B58,C20,C23 |
Chr5:9797128 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | D11 |
Chr5:9797128 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr5:9797143 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B30,D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。