Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID,以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因,再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr05G001255

染色体: Chr05 坐标: 10668401-10674404 链方向: + 类型: protein_coding

基本信息

统一新 Gene IDSmilChr05G001255
名称SmilChr05G001255
描述putative protein FAR1-RELATED SEQUENCE 10
染色体 / SeqIDChr05 / NC_080391.1
坐标与链方向10668401 - 10674404 / +

ID 对照

NCBI Gene IDLOC130985948
GeneID130985948
locus_tag-
NCBI NameLOC130985948
原始查询SmilChr05G001255

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述putative protein FAR1-RELATED SEQUENCE 10
产物putative protein FAR1-RELATED SEQUENCE 10
ArabidopsisAT5G28530 (FRS10)
FAR1-related sequence 10 [Source:NCBI gene (formerly Entrezgene);Acc:832948]
identity=55.7; qcov=0.958; evalue=0; confidence=high
RiceOs04g0443000
-
identity=38.6; qcov=0.986; evalue=1.08e-161; confidence=medium
GOGO:0006355 (regulation of DNA-templated transcription); GO:0008270 (zinc ion binding)
KEGG-
PfamPF03101 (FAR1); PF04434 (SWIM); PF10551 (MULE); PF21056 (ZSWIM1-3_RNaseH-like); PF26175 (HTH_FAR1)
InterPro-
eggNOG-
NRGeneID:130985948

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Nucleus 细胞核 1.00000 XP_057765134.1
2 Chromosome 染色体 0.00000 XP_057765134.1
3 Centromere 着丝粒 0.00000 XP_057765134.1
4 Chromatin 染色质 0.00000 XP_057765134.1
5 Telomere 端粒 0.00000 XP_057765134.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr5:10669623 G A EMS_canonical_SNV CDS_variant 2 B71,C61
Chr5:10669677 C T EMS_canonical_SNV CDS_variant 4 B55,C35,C85,D8
Chr5:10669688 G A EMS_canonical_SNV CDS_variant 1 D1
Chr5:10669745 C T EMS_canonical_SNV CDS_variant 1 D7
Chr5:10670015 G A EMS_canonical_SNV CDS_variant 1 D10
Chr5:10670236 C T EMS_canonical_SNV CDS_variant 1 C35
Chr5:10670237 G A EMS_canonical_SNV CDS_variant 1 D10
Chr5:10670492 C T EMS_canonical_SNV CDS_variant 2 A6,B87
Chr5:10670742 G A EMS_canonical_SNV CDS_variant 5 A8,B111,B131,B140,B35
Chr5:10670918 G GA 1bp_insertion frameshift_variant 1 B122
Chr5:10670918 G GA 1bp_insertion CDS_variant 1 B122
Chr5:10670919 G A EMS_canonical_SNV CDS_variant 1 B122

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。

XP_057765134.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765135.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765136.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765137.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765138.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765140.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765141.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765142.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765143.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765144.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765145.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765146.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765147.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765148.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765149.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765151.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765152.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765153.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765154.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765155.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765156.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765157.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765158.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765159.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765160.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765162.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
XP_057765163.1
693 aa
N
1
346
693
FAR1
HTH_FAR1
ZSWIM1-3_RNaseH-like
MULE
SWIM
C
PF03101 FAR1 68-159 aa PF26175 HTH_FAR1 172-226 aa PF21056 ZSWIM1-3_RNaseH-like 261-374 aa PF10551 MULE 291-383 aa PF04434 SWIM 570-597 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057765134.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765134.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765134.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765134.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765134.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765135.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765135.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765135.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765135.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765135.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765136.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765136.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765136.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765136.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765136.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765137.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765137.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765137.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765137.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765137.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765138.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765138.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765138.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765138.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765138.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765140.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765140.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765140.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765140.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765140.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765141.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765141.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765141.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765141.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765141.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765142.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765142.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765142.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765142.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765142.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765143.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765143.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765143.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765143.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765143.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765144.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765144.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765144.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765144.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765144.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765145.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765145.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765145.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765145.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765145.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765146.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765146.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765146.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765146.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765146.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765147.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765147.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765147.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765147.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765147.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765148.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765148.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765148.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765148.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765148.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765149.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765149.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765149.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765149.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765149.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765151.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765151.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765151.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765151.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765151.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765152.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765152.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765152.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765152.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765152.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765153.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765153.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765153.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765153.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765153.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765154.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765154.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765154.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765154.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765154.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765155.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765155.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765155.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765155.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765155.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765156.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765156.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765156.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765156.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765156.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765157.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765157.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765157.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765157.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765157.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765158.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765158.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765158.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765158.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765158.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765159.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765159.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765159.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765159.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765159.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765160.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765160.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765160.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765160.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765160.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765162.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765162.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765162.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765162.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765162.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger
XP_057765163.1 Pfam PF03101 FAR1 Domain 68 159 1.6e-23 83.9 FAR1 DNA-binding domain
XP_057765163.1 Pfam PF26175 HTH_FAR1 Domain 172 226 4.1e-25 88.1 FAR1 HTH-like domain
XP_057765163.1 Pfam PF21056 ZSWIM1-3_RNaseH-like Domain 261 374 1.1e-07 32.6 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
XP_057765163.1 Pfam PF10551 MULE Domain 291 383 3.3e-18 66.6 MULE transposase domain
XP_057765163.1 Pfam PF04434 SWIM Domain 570 597 4.3e-08 33.2 SWIM zinc finger

cDNA / CDS / Protein 序列

下载基因组 DNA(仅基因区域)

每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

27 records

下载 cDNA FASTA
XM_057909164.1
GTATTCGACTTGTTTGATACAAAGCACAATGGAATATTAGATTTTGAAGAGTTTGCACTTGCTCTATCAGTTTTCCATCTGAATGCTCCTATTGATGACGAGATTGAATGGTTTGTTTTGGTGCAACCATCAATTTTTGTTGGAGGTTTCTAGAACCAATTGAATTAGATAGTCTTATTCATACTAGAATTTGTCTATTGTGATTAATCATCAATGGTATCTCTACAGTCTAAGAGTGTTTGGATGAAAAGGCAGCAATG...
XM_057909157.1
GTATTCGACTTGTTTGATACAAAGCACAATGGAATATTAGATTTTGAAGAGTTTGCACTTGCTCTATCAGTTTTCCATCTGAATGCTCCTATTGATGACGAGATTGAATGGTTTGTTTTGGTGCAACCATCAATTTTTGTTGGAGGTTTCTAGAACCAATTGAATTAGATAGTCTTATTCATACTAGAATTTGTCTATTGTGATTAATCATCAATGGTATCTCTACAGTCTAAGAGTGTTTGGATGAAAAGGCAGCAATG...

CDS

27 records

下载 CDS FASTA
LOC130985948
ATGGTATCTCTACAGTCTAAGAGTGTTTGGATGAAAAGGCAGCAATGCCCATGTGGTGATTGGAAATGTTTTGTAACATATGAGGGAAACACCGATGAGGGAAGTGTTGTATCTCAATTAATCAAGAATGATTTGGGACCAACTGAAACTATGGTTGCCCCATACGTTGGGATGGTGTTTAAGAGTGATGATGAAGCATTTGAGTATTACGGGAGTTTTGCTAGAAAAAATGGGTTTTCGATCAGGAAAGAGAGGTCTCG...
LOC130985948
ATGGTATCTCTACAGTCTAAGAGTGTTTGGATGAAAAGGCAGCAATGCCCATGTGGTGATTGGAAATGTTTTGTAACATATGAGGGAAACACCGATGAGGGAAGTGTTGTATCTCAATTAATCAAGAATGATTTGGGACCAACTGAAACTATGGTTGCCCCATACGTTGGGATGGTGTTTAAGAGTGATGATGAAGCATTTGAGTATTACGGGAGTTTTGCTAGAAAAAATGGGTTTTCGATCAGGAAAGAGAGGTCTCG...

Protein

27 records

下载 Protein FASTA
XP_057765134.1
MVSLQSKSVWMKRQQCPCGDWKCFVTYEGNTDEGSVVSQLIKNDLGPTETMVAPYVGMVFKSDDEAFEYYGSFARKNGFSIRKERSRLSPQLGVYKRDFVCYRSGFAPPRKKQAGEHQRERKSVRCGCDAKMYLSKEVVDGDSQWFVVQFSNVHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPINRIVKVLELEKGIQGGQLSFLERDVRNFIQNRKKAVQENDALLTEKRENDTMDLLEACRANKEADPFFV...
XP_057765135.1
MVSLQSKSVWMKRQQCPCGDWKCFVTYEGNTDEGSVVSQLIKNDLGPTETMVAPYVGMVFKSDDEAFEYYGSFARKNGFSIRKERSRLSPQLGVYKRDFVCYRSGFAPPRKKQAGEHQRERKSVRCGCDAKMYLSKEVVDGDSQWFVVQFSNVHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPINRIVKVLELEKGIQGGQLSFLERDVRNFIQNRKKAVQENDALLTEKRENDTMDLLEACRANKEADPFFV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。

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