当前解析结果
SmilChr05G001329| 统一新 Gene ID | SmilChr05G001329 |
|---|---|
| 名称 | SmilChr05G001329 |
| 描述 | uncharacterized SmilChr05G001329 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 11564629 - 11565350 / - |
| NCBI Gene ID | LOC130986027 |
|---|---|
| GeneID | 130986027 |
| locus_tag | - |
| NCBI Name | LOC130986027 |
| 原始查询 | SmilChr05G001329 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:820470]; symbol=AT3G12870; hit=AT3G12870; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:820470]; symbol=AT3G12870; hit=AT3G12870; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G12870 (AT3G12870)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:820470] identity=69.5; qcov=0.995; evalue=2.16e-98; confidence=high |
| Rice | Os03g0778400- identity=58; qcov=0.956; evalue=1.7e-76; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130986027 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 0.80000 | XP_057765277.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 0.40000 | XP_057765277.1 |
| 3 | Golgi apparatus | 高尔基体 | 0.20000 | XP_057765277.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057765277.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057765277.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:11564768 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C35 |
Chr5:11564902 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B38,B39 |
Chr5:11564903 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A10,B112 |
Chr5:11564999 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A1,A2,B64 |
Chr5:11565080 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A19,B101,B54,C35 |
Chr5:11565108 |
AG |
A |
1bp_deletion | frameshift_variant | 27 | A16,A6,B108,B11,B15,B34,B42,B43,B45,B49,B5,B6,B60,B74,B79,B90,B92,C21,C30,C33,C39,C4,C40,C48,C57,C67,C8 |
Chr5:11565172 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。