当前解析结果
SmilChr05G001398| 统一新 Gene ID | SmilChr05G001398 |
|---|---|
| 名称 | SmilChr05G001398 |
| 描述 | uncharacterized SmilChr05G001398 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 12569385 - 12576372 / + |
| NCBI Gene ID | LOC130986090 |
|---|---|
| GeneID | 130986090 |
| locus_tag | - |
| NCBI Name | LOC130986090 |
| 原始查询 | SmilChr05G001398 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os04g0471400; species=rice; confidence=low |
| 产物 | hit=Os04g0471400; species=rice; confidence=low |
| Arabidopsis | AT5G56240 (AT5G56240)hapless protein [Source:NCBI gene (formerly Entrezgene);Acc:835723] identity=39.8; qcov=0.242; evalue=5.26e-38; confidence=weak |
| Rice | Os04g0471400- identity=35.5; qcov=0.351; evalue=1.43e-53; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130986090 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057765352.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057765352.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057765352.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057765352.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057765352.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:12570969 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B12 |
Chr5:12571998 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B38,B39 |
Chr5:12572836 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B131,B79 |
Chr5:12573446 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B38,B39 |
Chr5:12573583 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B65,C15,C73,D6 |
Chr5:12573659 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr5:12573700 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C15 |
Chr5:12573737 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B31,B57,B90,B92 |
Chr5:12573792 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A11,B33,B68,C48 |
Chr5:12573822 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C35 |
Chr5:12573937 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B33 |
Chr5:12574120 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。