当前解析结果
SmilChr05G001558| 统一新 Gene ID | SmilChr05G001558 |
|---|---|
| 名称 | SmilChr05G001558 |
| 描述 | uncharacterized SmilChr05G001558 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 14287915 - 14288623 / + |
| NCBI Gene ID | LOC130986247 |
|---|---|
| GeneID | 130986247 |
| locus_tag | - |
| NCBI Name | LOC130986247 |
| 原始查询 | SmilChr05G001558 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:835614]; symbol=AT5G55210; hit=AT5G55210; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:835614]; symbol=AT5G55210; hit=AT5G55210; species=arabidopsis; confidence=low |
| Arabidopsis | AT5G55210 (AT5G55210)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:835614] identity=38.9; qcov=1.21; evalue=1.7e-19; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130986247 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057765584.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057765584.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057765584.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057765584.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057765584.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:14288031 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B101,C61 |
Chr5:14288065 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr5:14288242 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B52 |
Chr5:14288455 |
GAT |
G |
2bp_deletion | frameshift_variant | 28 | A16,A25,B11,B120,B126,B15,B32,B34,B42,B43,B44,B6,B60,B90,B92,C12,C14,C21,C39,C4,C40,C45,C46,C47,C55,C59,C67,D4 |
Chr5:14288460 |
G |
GTC |
2bp_insertion | frameshift_variant | 46 | A10,A11,A20,A3,A7,B100,B106,B109,B11,B110,B114,B122,B127,B14,B21,B23,B34,B45,B46,B54,B63,B67,B71,B72,B76,B77,B95,C19,C26,C31,C33,C35,C38,C41,C42,C45,C47,C49,C52,C53,C55,C65,C73,C85,C9,D8 |
Chr5:14288464 |
CT |
C |
1bp_deletion | frameshift_variant | 1 | D11 |
Chr5:14288464 |
CT |
C |
1bp_deletion | CDS_variant | 1 | D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。