当前解析结果
SmilChr05G001607| 统一新 Gene ID | SmilChr05G001607 |
|---|---|
| 名称 | SmilChr05G001607 |
| 描述 | uncharacterized SmilChr05G001607 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 14815716 - 14817954 / + |
| NCBI Gene ID | LOC130986290 |
|---|---|
| GeneID | 130986290 |
| locus_tag | - |
| NCBI Name | LOC130986290 |
| 原始查询 | SmilChr05G001607 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | trigger factor [Source:NCBI gene (formerly Entrezgene);Acc:822141]; symbol=AT3G25545; hit=AT3G25545; species=arabidopsis; confidence=high |
| 产物 | trigger factor [Source:NCBI gene (formerly Entrezgene);Acc:822141]; symbol=AT3G25545; hit=AT3G25545; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G25545 (AT3G25545)trigger factor [Source:NCBI gene (formerly Entrezgene);Acc:822141] identity=54.6; qcov=1.01; evalue=1.17e-99; confidence=high |
| Rice | Os01g0219000- identity=36.6; qcov=0.842; evalue=3.77e-32; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130986290 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057765640.1 |
| 2 | Nucleolus | 核仁 | 0.20000 | XP_057765640.1 |
| 3 | Cytoplasm | 细胞质 | 0.20000 | XP_057765640.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057765640.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057765640.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:14817060 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C74 |
Chr5:14817291 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr5:14817470 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B24 |
Chr5:14817536 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A1,A2,A7 |
Chr5:14817679 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A5,B101,B70,D11 |
Chr5:14817726 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B10,C72 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。