当前解析结果
SmilChr05G001676| 统一新 Gene ID | SmilChr05G001676 |
|---|---|
| 名称 | SmilChr05G001676 |
| 描述 | uncharacterized SmilChr05G001676 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 15881913 - 15884728 / - |
| NCBI Gene ID | LOC130986348 |
|---|---|
| GeneID | 130986348 |
| locus_tag | - |
| NCBI Name | LOC130986348 |
| 原始查询 | SmilChr05G001676 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:822172]; symbol=AT3G25805; hit=AT3G25805; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:822172]; symbol=AT3G25805; hit=AT3G25805; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G25805 (AT3G25805)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:822172] identity=61.5; qcov=0.844; evalue=9.21e-132; confidence=high |
| Rice | Os04g0462300- identity=64.2; qcov=0.767; evalue=1.66e-126; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130986348 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057765723.1 |
| 2 | Chloroplast membrane | 叶绿体膜 | 1.00000 | XP_057765723.1 |
| 3 | Chloroplast thylakoid | 类囊体 | 0.40000 | XP_057765723.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057765723.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057765723.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:15882173 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr5:15882221 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B76,C53 |
Chr5:15882228 |
G |
GA |
1bp_insertion | frameshift_variant | 6 | B13,B2,B21,B33,B79,C60 |
Chr5:15882349 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr5:15882397 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A21,B122,B54,C42 |
Chr5:15882443 |
C |
CAT |
2bp_insertion | frameshift_variant | 3 | B140,B96,C79 |
Chr5:15882443 |
C |
CAT |
2bp_insertion | CDS_variant | 3 | B140,B96,C79 |
Chr5:15883198 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr5:15884377 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
Chr5:15884396 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B76,C53 |
Chr5:15884472 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。