Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G001796`

染色体: Chr05 坐标: 17709864-17715273 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G001796`
名称	SmilChr05G001796
描述	wall-associated receptor kinase-like 10
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	17709864 - 17715273 / `+`

ID 对照

NCBI Gene ID	`LOC130986460`
GeneID	`130986460`
locus_tag	`-`
NCBI Name	`LOC130986460`
原始查询	`SmilChr05G001796`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	wall-associated receptor kinase-like 10
产物	wall-associated receptor kinase-like 10
Arabidopsis	`AT1G79680` (WAKL10) WALL ASSOCIATED KINASE (WAK)-LIKE 10 [Source:NCBI gene (formerly Entrezgene);Acc:844307] identity=41.6; qcov=1.01; evalue=1.26e-133; confidence=medium
Rice	`Os04g0599000` (OsWAK53) - identity=37.6; qcov=0.969; evalue=2.99e-108; confidence=medium
GO	GO:0004674 (protein serine/threonine kinase activity); GO:0005509 (calcium ion binding); GO:0005524 (ATP binding); GO:0005886 (plasma membrane); GO:0006468 (protein phosphorylation); GO:0007166 (cell surface receptor signaling pathway)
KEGG	-
Pfam	PF00069 (Pkinase); PF07645 (EGF_CA); PF07714 (PK_Tyr_Ser-Thr)
InterPro	-
eggNOG	-
NR	GeneID:130986460

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057765856.1`
2	Nucleus	细胞核	0.00000	`XP_057765856.1`
3	Chromosome	染色体	0.00000	`XP_057765856.1`
4	Centromere	着丝粒	0.00000	`XP_057765856.1`
5	Chromatin	染色质	0.00000	`XP_057765856.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:17710979`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D3
`Chr5:17711079`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B120,B14,B27,B48,C2
`Chr5:17711113`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B42,C15
`Chr5:17711142`	`AC`	`A`	1bp_deletion	frameshift_variant	2	B42,C15
`Chr5:17711142`	`AC`	`A`	1bp_deletion	CDS_variant	2	B42,C15
`Chr5:17711153`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B42
`Chr5:17711158`	`T`	`TA`	1bp_insertion	frameshift_variant	5	A11,B26,B42,B87,C30
`Chr5:17711158`	`T`	`TA`	1bp_insertion	CDS_variant	5	A11,B26,B42,B87,C30
`Chr5:17711165`	`TGA`	`T`	2bp_deletion	frameshift_variant	9	A11,B26,B42,B58,B87,C15,C30,C50,C70
`Chr5:17711317`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A18,B50,B85,B91,C37
`Chr5:17711345`	`GGA`	`G`	2bp_deletion	frameshift_variant	39	A25,B1,B110,B113,B122,B125,B126,B134,B135,B138,B3,B35,B5,B55,B73,B8,B9,B94,B96,C16,C21,C25,C26,C32,C37,C38,C42,C52,C56,C61,C62,C63,C64,C72,C74,C8,C82,D4,D5
`Chr5:17711434`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B37

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057765856.1

618 aa

309

618

EGF_CA

Pkinase

PK_Tyr_Ser-Thr

PF07645 EGF_CA 315-343 aa PF00069 Pkinase 421-599 aa PF07714 PK_Tyr_Ser-Thr 424-603 aa

XP_057765858.1

618 aa

309

618

EGF_CA

Pkinase

PK_Tyr_Ser-Thr

PF07645 EGF_CA 315-343 aa PF00069 Pkinase 421-599 aa PF07714 PK_Tyr_Ser-Thr 424-603 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057765856.1`	Pfam	`PF07645`	EGF_CA	Domain	315	343	3.9e-06	27.7	Calcium-binding EGF domain
`XP_057765856.1`	Pfam	`PF00069`	Pkinase	Domain	421	599	2.7e-34	119.5	Protein kinase domain
`XP_057765856.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	424	603	3.9e-33	115.6	Protein tyrosine and serine/threonine kinase
`XP_057765858.1`	Pfam	`PF07645`	EGF_CA	Domain	315	343	3.9e-06	27.7	Calcium-binding EGF domain
`XP_057765858.1`	Pfam	`PF00069`	Pkinase	Domain	421	599	2.7e-34	119.5	Protein kinase domain
`XP_057765858.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	424	603	3.9e-33	115.6	Protein tyrosine and serine/threonine kinase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057909873.1
ATATTTCTTCCACTCAAAGCGTTGATTCCGAATAGTTTCTTTCAGTTGACCTCAGTTATTAGAGACACTGTAAATATCTATATCATCTATGTCAAAATCAGTCTCGTATCAGAAATTAATACAGTTCAACCATATCAAATCAGTTATTTTACTTGCAGTAGCACTGGAGTTCCATTTCTGGTGAAGTACCTTGCCGTCAAACCGTTACGTATTTTACTCTATGAGGATGATTTAGTATTTCTTTGTTATCCAACTTTACT...

XM_057909875.1
CACTCAAAGCGTTGATTCCGAATAGTTTCTTTCAGTTGACCTCAGTTATTAGAGACACTGTAAATATCTATATCATCTATGTCAAAATCAGTCTCGTATCAGAAATTAATACAGTTCAACCATATCAAATCAGTTATTTTACTTGCAGTAGCACTGGAGTTCCATTTCTGGTGAAGCTGATAAAAACAAAGGATGAGGTTTCACTTTATTACACACTGTGTCTTATGCTGGCTATGCCTCACCATAACTGTGAGTATTGC...

CDS

2 records

下载 CDS FASTA

LOC130986460
ATGAGGTTTCACTTTATTACACACTGTGTCTTATGCTGGCTATGCCTCACCATAACTGTGAGTATTGCGGTAACTTTGTCGAAGCCCGGTTGCCCCCATAAGTGTGGGAATGTCACCATTCCGTATCCTTTTGGGGTTGGTTTCAAATGCAGTGCACCGATTTTAGAATGCGATAACCCTTTTACGGATCGTTCCAAATGCAAAGAATCCCCTTACACAATCATCTGCCAAAATTCGTCGACTCCATTCTTGAGCATCAT...

Protein

2 records

下载 Protein FASTA

XP_057765856.1
MRFHFITHCVLCWLCLTITVSIAVTLSKPGCPHKCGNVTIPYPFGVGFKCSAPILECDNPFTDRSKCKESPYTIICQNSSTPFLSIIQMEVVKISLYGTLIVKLPVSPMNCSDMQTTLAVPISLDGSPFTISAHYNSLFVLGCKSSVWLRSETMQTVGGCTAICDANSTDTSCTGVNCCQTTIPERGQGLQYTYRSIEASNDSRFCGYAFPADRKWIQNAYTLHSGLMQDLLNPYDVGFRFAQVVIDWEYVGFEDFHYNT...

XP_057765858.1
MRFHFITHCVLCWLCLTITVSIAVTLSKPGCPHKCGNVTIPYPFGVGFKCSAPILECDNPFTDRSKCKESPYTIICQNSSTPFLSIIQMEVVKISLYGTLIVKLPVSPMNCSDMQTTLAVPISLDGSPFTISAHYNSLFVLGCKSSVWLRSETMQTVGGCTAICDANSTDTSCTGVNCCQTTIPERGQGLQYTYRSIEASNDSRFCGYAFPADRKWIQNAYTLHSGLMQDLLNPYDVGFRFAQVVIDWEYVGFEDFHYNT...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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