Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G001822`

染色体: Chr05 坐标: 18238806-18243569 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G001822`
名称	SmilChr05G001822
描述	mitogen-activated protein kinase 9
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	18238806 - 18243569 / `-`

ID 对照

NCBI Gene ID	`LOC130986496`
GeneID	`130986496`
locus_tag	`-`
NCBI Name	`LOC130986496`
原始查询	`SmilChr05G001822`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	mitogen-activated protein kinase 9
产物	mitogen-activated protein kinase 9
Arabidopsis	`AT1G73670` (MPK15) MAP kinase 15 [Source:NCBI gene (formerly Entrezgene);Acc:843702] identity=70.2; qcov=1; evalue=0; confidence=high
Rice	`Os06g0708000` (BWMK1) - identity=73; qcov=0.978; evalue=0; confidence=high
GO	GO:0004707 (MAP kinase activity); GO:0005524 (ATP binding); GO:0005634 (nucleus); GO:0005737 (cytoplasm); GO:0006468 (protein phosphorylation); GO:0035556 (intracellular signal transduction)
KEGG	-
Pfam	PF00069 (Pkinase); PF06293 (Kdo); PF07714 (PK_Tyr_Ser-Thr)
InterPro	-
eggNOG	-
NR	GeneID:130986496

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057765908.1`
2	Cytoplasm	细胞质	1.00000	`XP_057765908.1`
3	Cytosol	细胞质基质	0.60000	`XP_057765908.1`
4	Chromosome	染色体	0.00000	`XP_057765908.1`
5	Centromere	着丝粒	0.00000	`XP_057765908.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:18239212`	`A`	`ATT`	2bp_insertion	frameshift_variant	44	A1,A19,A20,B10,B104,B105,B109,B130,B133,B136,B26,B27,B28,B29,B35,B5,B50,B51,B54,B66,B78,B82,B84,B90,B92,B94,B96,C13,C20,C21,C23,C24,C27,C29,C37,C44,C47,C5,C50,C71,C75,D10,D3,D8
`Chr5:18239377`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B25,B91
`Chr5:18239438`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A21,B52,C29,C7
`Chr5:18239563`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C73,D6
`Chr5:18239604`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B1,B22,B56,B68,B96
`Chr5:18240179`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C31
`Chr5:18240205`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B22,B56,B96
`Chr5:18241568`	`TCA`	`T`	2bp_deletion	frameshift_variant	2	A10,B132
`Chr5:18241568`	`TCA`	`T`	2bp_deletion	CDS_variant	2	A10,B132

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057765908.1

493 aa

246

493

Pkinase

PK_Tyr_Ser-Thr

Kdo

PF00069 Pkinase 20-311 aa PF07714 PK_Tyr_Ser-Thr 21-237 aa PF06293 Kdo 50-161 aa

XP_057765909.1

493 aa

246

493

Pkinase

PK_Tyr_Ser-Thr

Kdo

PF00069 Pkinase 20-311 aa PF07714 PK_Tyr_Ser-Thr 21-237 aa PF06293 Kdo 50-161 aa

XP_057765910.1

493 aa

246

493

Pkinase

PK_Tyr_Ser-Thr

Kdo

PF00069 Pkinase 20-311 aa PF07714 PK_Tyr_Ser-Thr 21-237 aa PF06293 Kdo 50-161 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057765908.1`	Pfam	`PF00069`	Pkinase	Domain	20	311	9.6e-66	222.6	Protein kinase domain
`XP_057765908.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	21	237	1.3e-30	107.3	Protein tyrosine and serine/threonine kinase
`XP_057765908.1`	Pfam	`PF06293`	Kdo	Family	50	161	1e-05	25.8	Lipopolysaccharide kinase (Kdo/WaaP) family
`XP_057765909.1`	Pfam	`PF00069`	Pkinase	Domain	20	311	9.6e-66	222.6	Protein kinase domain
`XP_057765909.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	21	237	1.3e-30	107.3	Protein tyrosine and serine/threonine kinase
`XP_057765909.1`	Pfam	`PF06293`	Kdo	Family	50	161	1e-05	25.8	Lipopolysaccharide kinase (Kdo/WaaP) family
`XP_057765910.1`	Pfam	`PF00069`	Pkinase	Domain	20	311	9.6e-66	222.6	Protein kinase domain
`XP_057765910.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	21	237	1.3e-30	107.3	Protein tyrosine and serine/threonine kinase
`XP_057765910.1`	Pfam	`PF06293`	Kdo	Family	50	161	1e-05	25.8	Lipopolysaccharide kinase (Kdo/WaaP) family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057909925.1
TTTCCTTTCACCAACATCTCGCTCAATTGGTTCTTTCCTTATTTAATTTTCTTTTCCTTTAATTGTGGGCTTTTTCTCAACTTCACAATTTTAAGTGAATATCAAGGAACCGACACTATTTGATTGATACCCCCATCTCTTTCACTCGCTCGAGTTGATTTGAGTTCACACAAAAATTAGTGGAAAAAGCTTCAATTTTTTGTAGTAAGTATATTATATGGACGTGGAATTTTGGGTTTTCTTGTGTAGTAGATCTCAAG...

XM_057909927.1
ATTGGTTCTTTCCTTATTTAATTTTCTTTTCCTTTAATTGTGGGCTTTTTCTCAACTTCACAATTTTAAGTGAATATCAAGGAACCGACACTATTTGATTGATACCCCCATCTCTTTCACTCGCTCGAGTTGATTTGAGTTCACACAAAAATTAGTGGAAAAAGCTTCAATTTTTTGTAGTAAGTATATTATATGGACGTGGAATTTTGGGTTTTCTTGTGTAGTAGATCTCAAGTTCGCCTATAGGAAAAAATCAAATC...

CDS

3 records

下载 CDS FASTA

LOC130986496
ATGATTCAGAACATGCCTTTCAAGGACTTCTTCACCGAGTATGGTGAAGCAAATTTATATGAAATCCAAGAGGTTGTTGGTAAGGGAAGTTATGGTGTTGTGGCTGCCGCAGTTGATACTCACACTGGAGAAAAGGTGGCCATAAAGAAGATCAATGACATTTTCGAGCATGTCTGTGAAGCTACTCGCATTCTCAGAGAGATCAAACTCCTCAGGTTGCTTCGGCACCCAGACATTGTTGAAATTAAGCATATCATGTT...

Protein

3 records

下载 Protein FASTA

XP_057765908.1
MIQNMPFKDFFTEYGEANLYEIQEVVGKGSYGVVAAAVDTHTGEKVAIKKINDIFEHVCEATRILREIKLLRLLRHPDIVEIKHIMLPPCRREFKDIYVVFELMETDLHHVIKTNDDLTPGHHQFFLYQLLRALKYIHSANVFHRDLKPKNILANADCKLKICDFGLARASFGDAPSAVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMVTGKPLFPGKNVVHQLELITDLLGTPSHEAISRIRNEKARR...

XP_057765909.1
MIQNMPFKDFFTEYGEANLYEIQEVVGKGSYGVVAAAVDTHTGEKVAIKKINDIFEHVCEATRILREIKLLRLLRHPDIVEIKHIMLPPCRREFKDIYVVFELMETDLHHVIKTNDDLTPGHHQFFLYQLLRALKYIHSANVFHRDLKPKNILANADCKLKICDFGLARASFGDAPSAVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMVTGKPLFPGKNVVHQLELITDLLGTPSHEAISRIRNEKARR...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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