Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G002074`

染色体: Chr05 坐标: 21641784-21648776 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G002074`
名称	SmilChr05G002074
描述	uncharacterized SmilChr05G002074
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	21641784 - 21648776 / `-`

ID 对照

NCBI Gene ID	`LOC130986704`
GeneID	`130986704`
locus_tag	`-`
NCBI Name	`LOC130986704`
原始查询	`SmilChr05G002074`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	FG-GAP repeat-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:824269]; symbol=AT3G51050; hit=AT3G51050; species=arabidopsis; confidence=high
产物	FG-GAP repeat-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:824269]; symbol=AT3G51050; hit=AT3G51050; species=arabidopsis; confidence=high
Arabidopsis	`AT3G51050` (AT3G51050) FG-GAP repeat-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:824269] identity=75.9; qcov=1; evalue=0; confidence=high
Rice	`Os02g0100700` - identity=72.4; qcov=1.01; evalue=0; confidence=high
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130986704

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	1.00000	`XP_057766162.1`
2	Endoplasmic reticulum membrane	内质网膜	1.00000	`XP_057766162.1`
3	Endoplasmic reticulum-golgi intermediate compartment	Endoplasmic reticulum-golgi intermediate compartment	0.80000	`XP_057766163.1`
4	Golgi apparatus	高尔基体	0.40000	`XP_057766162.1`
5	Cis-golgi network	Cis-golgi network	0.40000	`XP_057766162.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:21642252`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B117,B21,B46,B59,B89
`Chr5:21642363`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A10
`Chr5:21642471`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B23,C28
`Chr5:21642472`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C7
`Chr5:21642570`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A11,A3,B22
`Chr5:21644474`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A2,A21,A6,B82,C78
`Chr5:21646161`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B100,B125,B67,C19,C24
`Chr5:21646472`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B137,C40
`Chr5:21646779`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B52,B57,C24,C29
`Chr5:21646844`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B22
`Chr5:21647704`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B64
`Chr5:21647761`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B112

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057910180.1
TACAACATGAACCGGGTACGAATTTGGATTCGAAGTCGACTCCCGAAAATAGAAGCGTGACCCGTTTCCTTCTCTCTCTAGACTGAAGCAGAAGAGAAGCTGAGGAAGACGATGGAAATCTTCCTGCTTTCCAATTGATCCATCAAATATTAGTATTTAGCAGAAAAATTTCACGAGTAATCAAGAACTAGCTGGAACAATTCTGAAACAAGAGGATATTCAAGATGAGGAAGCGAGATTTAGCAATTCTGATGCTCTCG...

XM_057910179.1
CAACATGAACCGGGTACGAATTTGGATTCGAAGTCGACTCCCGAAAATAGAAGCGTGACCCGTTTCCTTCTCTCTCTAGACTGAAGCAGAAGAGAAGCTGAGGAAGACGATGGAAATCTTCCTGCTTTCCAATTGATCCATCAAATATTAGTATTTAGCAGAAAAATTTCACGAGTAATCAAGAACTAGCTGGAACAATTCTGAAACAAGAGGATATTCAAGATGAGGAAGCGAGATTTAGCAATTCTGATGCTCTCGGC...

CDS

2 records

下载 CDS FASTA

LOC130986704
ATGAGGAAGCGAGATTTAGCAATTCTGATGCTCTCGGCTTTCGCCATTTTCTTCTCTCTCCAGCACGAGGGTGATTTCTCGTTCAAAGAGGCGTGGTTCCATCTCTCCGATGAGTATCCGATAAAGTACGAGGGCGACCGCCTCCCGCCGCCGATTGTCGCCGATCTGAACGGCGACGGGAAGAAGGAGGTTCTTATAGCCACGCACGATGCAAAAATTCAGGTTTTGGAACCTCATTCAAGACGTGTGGATGAAGGGTT...

Protein

2 records

下载 Protein FASTA

XP_057766162.1
MRKRDLAILMLSAFAIFFSLQHEGDFSFKEAWFHLSDEYPIKYEGDRLPPPIVADLNGDGKKEVLIATHDAKIQVLEPHSRRVDEGFSEARVLAEVSLLPDKLRIATGRRAVAMATGVIEKTYNKREARKQVLVVVTSGWSVMCFDHNLKKLWEVNLQKDFPHNAHHREIAISVSNYTLRHGDAGLVIVGGRMEMQPHMHFDPFEEIELAEKKAEEHRRSATEKDESENAGTVDLRHFAFYAFAGRSGELRWTRKKENID...

XP_057766163.1
MRKRDLAILMLSAFAIFFSLQHEGDFSFKEAWFHLSDEYPIKYEGDRLPPPIVADLNGDGKKEVLIATHDAKIQVLEPHSRRVDEGFSEARVLAEVSLLPDKLRIATGRRAVAMATGVIEKTYNKREARKQVLVVVTSGWSVMCFDHNLKKLWEVNLQDFPHNAHHREIAISVSNYTLRHGDAGLVIVGGRMEMQPHMHFDPFEEIELAEKKAEEHRRSATEKDESENAGTVDLRHFAFYAFAGRSGELRWTRKKENIDA...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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