当前解析结果
SmilChr05G002091| 统一新 Gene ID | SmilChr05G002091 |
|---|---|
| 名称 | SmilChr05G002091 |
| 描述 | uncharacterized SmilChr05G002091 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 21887826 - 21894123 / - |
| NCBI Gene ID | LOC130986721 |
|---|---|
| GeneID | 130986721 |
| locus_tag | - |
| NCBI Name | LOC130986721 |
| 原始查询 | SmilChr05G002091 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | G-protein coupled receptor [Source:NCBI gene (formerly Entrezgene);Acc:829796]; symbol=AT4G36440; hit=AT4G36440; species=arabidopsis; confidence=high |
| 产物 | G-protein coupled receptor [Source:NCBI gene (formerly Entrezgene);Acc:829796]; symbol=AT4G36440; hit=AT4G36440; species=arabidopsis; confidence=high |
| Arabidopsis | AT4G36440 (AT4G36440)G-protein coupled receptor [Source:NCBI gene (formerly Entrezgene);Acc:829796] identity=55.5; qcov=0.973; evalue=6.57e-164; confidence=high |
| Rice | Os01g0262700 (P0469E09.26-1)- identity=52; qcov=0.718; evalue=1.27e-111; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130986721 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057766194.1 |
| 2 | Cytoplasmic vesicle | 细胞质囊泡 | 0.20000 | XP_057766195.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057766194.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057766194.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057766194.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:21888180 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A15,B108,C2,C40,D1 |
Chr5:21888718 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B94 |
Chr5:21888922 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B5,B83,C10,C52,C59 |
Chr5:21890058 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A2,A21,A6,B82,C78 |
Chr5:21891859 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B130,B136,C33 |
Chr5:21891865 |
T |
TTA |
2bp_insertion | frameshift_variant | 1 | B75 |
Chr5:21891865 |
T |
TTA |
2bp_insertion | CDS_variant | 1 | B75 |
Chr5:21891885 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C38 |
Chr5:21893031 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C7 |
Chr5:21893052 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B94 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。