当前解析结果
SmilChr05G002304| 统一新 Gene ID | SmilChr05G002304 |
|---|---|
| 名称 | SmilChr05G002304 |
| 描述 | uncharacterized SmilChr05G002304 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 24902652 - 24905557 / + |
| NCBI Gene ID | LOC131024209 |
|---|---|
| GeneID | 131024209 |
| locus_tag | - |
| NCBI Name | LOC131024209 |
| 原始查询 | SmilChr05G002304 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | antigenic heat-stable protein [Source:NCBI gene (formerly Entrezgene);Acc:842095]; symbol=AT1G56420; hit=AT1G56420; species=arabidopsis; confidence=high |
| 产物 | antigenic heat-stable protein [Source:NCBI gene (formerly Entrezgene);Acc:842095]; symbol=AT1G56420; hit=AT1G56420; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G56420 (AT1G56420)antigenic heat-stable protein [Source:NCBI gene (formerly Entrezgene);Acc:842095] identity=70.5; qcov=0.876; evalue=1.6e-73; confidence=high |
| Rice | Os12g0560600- identity=53.9; qcov=1.02; evalue=3.29e-58; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131024209 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057809702.1 |
| 2 | Nucleoplasm | 核质 | 1.00000 | XP_057809702.1 |
| 3 | Nuclear body | 核内小体 | 0.40000 | XP_057809702.1 |
| 4 | Cytoplasm | 细胞质 | 0.40000 | XP_057809702.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057809702.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:24902980 |
C |
T |
EMS_canonical_SNV | stop_gained | 2 | B78,C23 |
Chr5:24902980 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B78,C23 |
Chr5:24904404 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B14 |
Chr5:24905055 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B26,B61,B64 |
Chr5:24905152 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C3 |
Chr5:24905189 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C11,C69 |
Chr5:24905190 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A20,C15,C70 |
Chr5:24905258 |
AC |
A |
1bp_deletion | frameshift_variant | 1 | B79 |
Chr5:24905258 |
AC |
A |
1bp_deletion | CDS_variant | 1 | B79 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。