当前解析结果
SmilChr05G002459| 统一新 Gene ID | SmilChr05G002459 |
|---|---|
| 名称 | SmilChr05G002459 |
| 描述 | uncharacterized SmilChr05G002459 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 27121433 - 27124511 / - |
| NCBI Gene ID | LOC131026233 |
|---|---|
| GeneID | 131026233 |
| locus_tag | - |
| NCBI Name | LOC131026233 |
| 原始查询 | SmilChr05G002459 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | GRF zinc finger / Zinc knuckle protein [Source:NCBI gene (formerly Entrezgene);Acc:831239]; symbol=AT5G13920; hit=AT5G13920; species=arabidopsis; confidence=low |
| 产物 | GRF zinc finger / Zinc knuckle protein [Source:NCBI gene (formerly Entrezgene);Acc:831239]; symbol=AT5G13920; hit=AT5G13920; species=arabidopsis; confidence=low |
| Arabidopsis | AT5G13920 (AT5G13920)GRF zinc finger / Zinc knuckle protein [Source:NCBI gene (formerly Entrezgene);Acc:831239] identity=43.4; qcov=0.398; evalue=2.17e-06; confidence=low |
| Rice | -- |
| GO | GO:0008270 (zinc ion binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131026233 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 0.80000 | XP_057812003.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057812003.1 |
| 3 | Endoplasmic reticulum membrane | 内质网膜 | 0.60000 | XP_057812003.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057812003.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057812003.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:27121585 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr5:27121639 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B23 |
Chr5:27121736 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B29,B68,B72,D3 |
Chr5:27121762 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr5:27121863 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B106,B139,B75 |
Chr5:27121867 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A20,C15,C34,C70 |
Chr5:27121869 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C12 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。