当前解析结果
SmilChr05G002476| 统一新 Gene ID | SmilChr05G002476 |
|---|---|
| 名称 | SmilChr05G002476 |
| 描述 | uncharacterized SmilChr05G002476 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 27279946 - 27284217 / - |
| NCBI Gene ID | LOC131026250 |
|---|---|
| GeneID | 131026250 |
| locus_tag | - |
| NCBI Name | LOC131026250 |
| 原始查询 | SmilChr05G002476 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os02g0307900; species=rice; confidence=low |
| 产物 | hit=Os02g0307900; species=rice; confidence=low |
| Arabidopsis | AT1G51172 (AT1G51172)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:3767434] identity=28.8; qcov=0.302; evalue=3.12e-14; confidence=low |
| Rice | Os02g0307900- identity=28.1; qcov=0.329; evalue=4.47e-15; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131026250 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057812030.1 |
| 2 | Nucleoplasm | 核质 | 0.20000 | XP_057812030.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057812030.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057812030.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057812030.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:27280208 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C27,C68 |
Chr5:27280224 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A7,B139,C56,C65,D10 |
Chr5:27280237 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C47 |
Chr5:27280252 |
G |
A |
EMS_canonical_SNV | stop_gained | 6 | B138,B22,B53,B85,B99,C31 |
Chr5:27280332 |
GC |
G |
1bp_deletion | frameshift_variant | 2 | B99,C4 |
Chr5:27280332 |
GC |
G |
1bp_deletion | CDS_variant | 2 | B99,C4 |
Chr5:27280345 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A24,B140,C56 |
Chr5:27280369 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A7,B64,B93,D6 |
Chr5:27280403 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B127,B40,C58 |
Chr5:27280439 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B118,B33,B85,C41 |
Chr5:27280440 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr5:27280495 |
G |
A |
EMS_canonical_SNV | stop_gained | 2 | B136,C29 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。