当前解析结果
SmilChr05G002664| 统一新 Gene ID | SmilChr05G002664 |
|---|---|
| 名称 | SmilChr05G002664 |
| 描述 | uncharacterized SmilChr05G002664 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 30138943 - 30147924 / - |
| NCBI Gene ID | LOC131026371 |
|---|---|
| GeneID | 131026371 |
| locus_tag | - |
| NCBI Name | LOC131026371 |
| 原始查询 | SmilChr05G002664 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | portal protein [Source:NCBI gene (formerly Entrezgene);Acc:834884]; symbol=AT5G48310; hit=AT5G48310; species=arabidopsis; confidence=high |
| 产物 | portal protein [Source:NCBI gene (formerly Entrezgene);Acc:834884]; symbol=AT5G48310; hit=AT5G48310; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G48310 (AT5G48310)portal protein [Source:NCBI gene (formerly Entrezgene);Acc:834884] identity=54.7; qcov=0.985; evalue=0; confidence=high |
| Rice | Os02g0198400- identity=44.7; qcov=1.03; evalue=0; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131026371 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Golgi apparatus | 高尔基体 | 0.40000 | XP_057812221.1 |
| 2 | Trans-golgi network | Trans-golgi network | 0.40000 | XP_057812221.1 |
| 3 | Clathrin-coated vesicle | Clathrin-coated vesicle | 0.20000 | XP_057812221.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057812221.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057812221.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:30139193 |
AT |
A |
1bp_deletion | frameshift_variant | 2 | B56,B96 |
Chr5:30139193 |
AT |
A |
1bp_deletion | CDS_variant | 2 | B56,B96 |
Chr5:30139367 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A4 |
Chr5:30139647 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | C18,C29,C72,D2 |
Chr5:30139965 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C85 |
Chr5:30140445 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B25 |
Chr5:30140490 |
AT |
A |
1bp_deletion | frameshift_variant | 1 | C9 |
Chr5:30140490 |
AT |
A |
1bp_deletion | CDS_variant | 1 | C9 |
Chr5:30141331 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | B57 |
Chr5:30141331 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B57 |
Chr5:30141356 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B112 |
Chr5:30141543 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D1 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。