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调控/突变
TF 结合位点 TF 靶基因 EMS 突变
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中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr05G002721

染色体: Chr05 坐标: 31311539-31316331 链方向: + 类型: protein_coding

基本信息

统一新 Gene IDSmilChr05G002721
名称SmilChr05G002721
描述leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230
染色体 / SeqIDChr05 / NC_080391.1
坐标与链方向31311539 - 31316331 / +

ID 对照

NCBI Gene IDLOC131026455
GeneID131026455
locus_tag-
NCBI NameLOC131026455
原始查询SmilChr05G002721

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230
产物leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230
ArabidopsisAT1G17230 (AT1G17230)
Leucine-rich receptor-like protein kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:838294]
identity=63.7; qcov=0.996; evalue=0; confidence=high
RiceOs07g0152200
-
identity=59.5; qcov=0.979; evalue=0; confidence=high
GOGO:0004672 (protein kinase activity); GO:0005515 (protein binding); GO:0005524 (ATP binding); GO:0005886 (plasma membrane); GO:0006468 (protein phosphorylation); GO:0009755 (hormone-mediated signaling pathway)
KEGG-
PfamPF00069 (Pkinase); PF00560 (LRR_1); PF07714 (PK_Tyr_Ser-Thr); PF08263 (LRRNT_2); PF13855 (LRR_8); PF23598 (LRR_14)
InterPro-
eggNOG-
NRGeneID:131026455

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Cell membrane 细胞膜 1.00000 XP_057812308.1
2 Nucleus 细胞核 0.00000 XP_057812308.1
3 Chromosome 染色体 0.00000 XP_057812308.1
4 Centromere 着丝粒 0.00000 XP_057812308.1
5 Chromatin 染色质 0.00000 XP_057812308.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr5:31312618 C T EMS_canonical_SNV CDS_variant 1 C83
Chr5:31313460 G A EMS_canonical_SNV CDS_variant 4 A6,B10,B17,B65
Chr5:31313952 C T EMS_canonical_SNV CDS_variant 3 B24,B94,C35
Chr5:31313997 C T EMS_canonical_SNV CDS_variant 1 B112
Chr5:31314056 G A EMS_canonical_SNV CDS_variant 1 C2
Chr5:31314117 G A EMS_canonical_SNV CDS_variant 1 D1
Chr5:31314344 G A EMS_canonical_SNV CDS_variant 1 B108
Chr5:31314761 C T EMS_canonical_SNV CDS_variant 1 B104
Chr5:31314790 G A EMS_canonical_SNV CDS_variant 1 B104
Chr5:31314881 C T EMS_canonical_SNV CDS_variant 3 B112,C11,C69
Chr5:31315044 G A EMS_canonical_SNV CDS_variant 1 B108

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057812308.1
1096 aa
N
1
548
1096
LRRNT_2
LRR_14
LRR_14
LRR_1
LRR_1
LRR_1
LRR_1
LRR_1
LRR_1
LRR_8
LRR_1
LRR_1
LRR_1
LRR_1
Pkinase
PK_Tyr_Ser-Thr
C
PF08263 LRRNT_2 23-63 aa PF23598 LRR_14 82-194 aa PF23598 LRR_14 111-239 aa PF00560 LRR_1 141-163 aa PF00560 LRR_1 165-187 aa PF00560 LRR_1 238-259 aa PF00560 LRR_1 357-379 aa PF00560 LRR_1 501-523 aa PF00560 LRR_1 549-569 aa PF13855 LRR_8 549-607 aa PF00560 LRR_1 573-595 aa PF00560 LRR_1 597-619 aa PF00560 LRR_1 626-644 aa PF00560 LRR_1 647-668 aa PF00069 Pkinase 802-1067 aa PF07714 PK_Tyr_Ser-Thr 804-1070 aa
XP_057812309.1
1096 aa
N
1
548
1096
LRRNT_2
LRR_14
LRR_14
LRR_1
LRR_1
LRR_1
LRR_1
LRR_1
LRR_1
LRR_8
LRR_1
LRR_1
LRR_1
LRR_1
Pkinase
PK_Tyr_Ser-Thr
C
PF08263 LRRNT_2 23-63 aa PF23598 LRR_14 82-194 aa PF23598 LRR_14 111-239 aa PF00560 LRR_1 141-163 aa PF00560 LRR_1 165-187 aa PF00560 LRR_1 238-259 aa PF00560 LRR_1 357-379 aa PF00560 LRR_1 501-523 aa PF00560 LRR_1 549-569 aa PF13855 LRR_8 549-607 aa PF00560 LRR_1 573-595 aa PF00560 LRR_1 597-619 aa PF00560 LRR_1 626-644 aa PF00560 LRR_1 647-668 aa PF00069 Pkinase 802-1067 aa PF07714 PK_Tyr_Ser-Thr 804-1070 aa
XP_057812310.1
1096 aa
N
1
548
1096
LRRNT_2
LRR_14
LRR_14
LRR_1
LRR_1
LRR_1
LRR_1
LRR_1
LRR_1
LRR_8
LRR_1
LRR_1
LRR_1
LRR_1
Pkinase
PK_Tyr_Ser-Thr
C
PF08263 LRRNT_2 23-63 aa PF23598 LRR_14 82-194 aa PF23598 LRR_14 111-239 aa PF00560 LRR_1 141-163 aa PF00560 LRR_1 165-187 aa PF00560 LRR_1 238-259 aa PF00560 LRR_1 357-379 aa PF00560 LRR_1 501-523 aa PF00560 LRR_1 549-569 aa PF13855 LRR_8 549-607 aa PF00560 LRR_1 573-595 aa PF00560 LRR_1 597-619 aa PF00560 LRR_1 626-644 aa PF00560 LRR_1 647-668 aa PF00069 Pkinase 802-1067 aa PF07714 PK_Tyr_Ser-Thr 804-1070 aa
XP_057812311.1
1096 aa
N
1
548
1096
LRRNT_2
LRR_14
LRR_14
LRR_1
LRR_1
LRR_1
LRR_1
LRR_1
LRR_1
LRR_8
LRR_1
LRR_1
LRR_1
LRR_1
Pkinase
PK_Tyr_Ser-Thr
C
PF08263 LRRNT_2 23-63 aa PF23598 LRR_14 82-194 aa PF23598 LRR_14 111-239 aa PF00560 LRR_1 141-163 aa PF00560 LRR_1 165-187 aa PF00560 LRR_1 238-259 aa PF00560 LRR_1 357-379 aa PF00560 LRR_1 501-523 aa PF00560 LRR_1 549-569 aa PF13855 LRR_8 549-607 aa PF00560 LRR_1 573-595 aa PF00560 LRR_1 597-619 aa PF00560 LRR_1 626-644 aa PF00560 LRR_1 647-668 aa PF00069 Pkinase 802-1067 aa PF07714 PK_Tyr_Ser-Thr 804-1070 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057812308.1 Pfam PF08263 LRRNT_2 Family 23 63 8.2e-13 49.1 Leucine rich repeat N-terminal domain
XP_057812308.1 Pfam PF23598 LRR_14 Repeat 82 194 7.1e-32 111.2 Leucine-rich repeat region
XP_057812308.1 Pfam PF23598 LRR_14 Repeat 111 239 7.1e-32 111.2 Leucine-rich repeat region
XP_057812308.1 Pfam PF00560 LRR_1 Repeat 141 163 2.8e-53 167.0 Leucine Rich Repeat
XP_057812308.1 Pfam PF00560 LRR_1 Repeat 165 187 2.8e-53 167.0 Leucine Rich Repeat
XP_057812308.1 Pfam PF00560 LRR_1 Repeat 238 259 2.8e-53 167.0 Leucine Rich Repeat
XP_057812308.1 Pfam PF00560 LRR_1 Repeat 357 379 2.8e-53 167.0 Leucine Rich Repeat
XP_057812308.1 Pfam PF00560 LRR_1 Repeat 501 523 2.8e-53 167.0 Leucine Rich Repeat
XP_057812308.1 Pfam PF00560 LRR_1 Repeat 549 569 2.8e-53 167.0 Leucine Rich Repeat
XP_057812308.1 Pfam PF13855 LRR_8 Repeat 549 607 1.9e-41 140.3 Leucine rich repeat
XP_057812308.1 Pfam PF00560 LRR_1 Repeat 573 595 2.8e-53 167.0 Leucine Rich Repeat
XP_057812308.1 Pfam PF00560 LRR_1 Repeat 597 619 2.8e-53 167.0 Leucine Rich Repeat
XP_057812308.1 Pfam PF00560 LRR_1 Repeat 626 644 2.8e-53 167.0 Leucine Rich Repeat
XP_057812308.1 Pfam PF00560 LRR_1 Repeat 647 668 2.8e-53 167.0 Leucine Rich Repeat
XP_057812308.1 Pfam PF00069 Pkinase Domain 802 1067 1.9e-43 149.5 Protein kinase domain
XP_057812308.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 804 1070 1.1e-41 143.6 Protein tyrosine and serine/threonine kinase
XP_057812309.1 Pfam PF08263 LRRNT_2 Family 23 63 8.2e-13 49.1 Leucine rich repeat N-terminal domain
XP_057812309.1 Pfam PF23598 LRR_14 Repeat 82 194 7.1e-32 111.2 Leucine-rich repeat region
XP_057812309.1 Pfam PF23598 LRR_14 Repeat 111 239 7.1e-32 111.2 Leucine-rich repeat region
XP_057812309.1 Pfam PF00560 LRR_1 Repeat 141 163 2.8e-53 167.0 Leucine Rich Repeat
XP_057812309.1 Pfam PF00560 LRR_1 Repeat 165 187 2.8e-53 167.0 Leucine Rich Repeat
XP_057812309.1 Pfam PF00560 LRR_1 Repeat 238 259 2.8e-53 167.0 Leucine Rich Repeat
XP_057812309.1 Pfam PF00560 LRR_1 Repeat 357 379 2.8e-53 167.0 Leucine Rich Repeat
XP_057812309.1 Pfam PF00560 LRR_1 Repeat 501 523 2.8e-53 167.0 Leucine Rich Repeat
XP_057812309.1 Pfam PF00560 LRR_1 Repeat 549 569 2.8e-53 167.0 Leucine Rich Repeat
XP_057812309.1 Pfam PF13855 LRR_8 Repeat 549 607 1.9e-41 140.3 Leucine rich repeat
XP_057812309.1 Pfam PF00560 LRR_1 Repeat 573 595 2.8e-53 167.0 Leucine Rich Repeat
XP_057812309.1 Pfam PF00560 LRR_1 Repeat 597 619 2.8e-53 167.0 Leucine Rich Repeat
XP_057812309.1 Pfam PF00560 LRR_1 Repeat 626 644 2.8e-53 167.0 Leucine Rich Repeat
XP_057812309.1 Pfam PF00560 LRR_1 Repeat 647 668 2.8e-53 167.0 Leucine Rich Repeat
XP_057812309.1 Pfam PF00069 Pkinase Domain 802 1067 1.9e-43 149.5 Protein kinase domain
XP_057812309.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 804 1070 1.1e-41 143.6 Protein tyrosine and serine/threonine kinase
XP_057812310.1 Pfam PF08263 LRRNT_2 Family 23 63 8.2e-13 49.1 Leucine rich repeat N-terminal domain
XP_057812310.1 Pfam PF23598 LRR_14 Repeat 82 194 7.1e-32 111.2 Leucine-rich repeat region
XP_057812310.1 Pfam PF23598 LRR_14 Repeat 111 239 7.1e-32 111.2 Leucine-rich repeat region
XP_057812310.1 Pfam PF00560 LRR_1 Repeat 141 163 2.8e-53 167.0 Leucine Rich Repeat
XP_057812310.1 Pfam PF00560 LRR_1 Repeat 165 187 2.8e-53 167.0 Leucine Rich Repeat
XP_057812310.1 Pfam PF00560 LRR_1 Repeat 238 259 2.8e-53 167.0 Leucine Rich Repeat
XP_057812310.1 Pfam PF00560 LRR_1 Repeat 357 379 2.8e-53 167.0 Leucine Rich Repeat
XP_057812310.1 Pfam PF00560 LRR_1 Repeat 501 523 2.8e-53 167.0 Leucine Rich Repeat
XP_057812310.1 Pfam PF00560 LRR_1 Repeat 549 569 2.8e-53 167.0 Leucine Rich Repeat
XP_057812310.1 Pfam PF13855 LRR_8 Repeat 549 607 1.9e-41 140.3 Leucine rich repeat
XP_057812310.1 Pfam PF00560 LRR_1 Repeat 573 595 2.8e-53 167.0 Leucine Rich Repeat
XP_057812310.1 Pfam PF00560 LRR_1 Repeat 597 619 2.8e-53 167.0 Leucine Rich Repeat
XP_057812310.1 Pfam PF00560 LRR_1 Repeat 626 644 2.8e-53 167.0 Leucine Rich Repeat
XP_057812310.1 Pfam PF00560 LRR_1 Repeat 647 668 2.8e-53 167.0 Leucine Rich Repeat
XP_057812310.1 Pfam PF00069 Pkinase Domain 802 1067 1.9e-43 149.5 Protein kinase domain
XP_057812310.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 804 1070 1.1e-41 143.6 Protein tyrosine and serine/threonine kinase
XP_057812311.1 Pfam PF08263 LRRNT_2 Family 23 63 8.2e-13 49.1 Leucine rich repeat N-terminal domain
XP_057812311.1 Pfam PF23598 LRR_14 Repeat 82 194 7.1e-32 111.2 Leucine-rich repeat region
XP_057812311.1 Pfam PF23598 LRR_14 Repeat 111 239 7.1e-32 111.2 Leucine-rich repeat region
XP_057812311.1 Pfam PF00560 LRR_1 Repeat 141 163 2.8e-53 167.0 Leucine Rich Repeat
XP_057812311.1 Pfam PF00560 LRR_1 Repeat 165 187 2.8e-53 167.0 Leucine Rich Repeat
XP_057812311.1 Pfam PF00560 LRR_1 Repeat 238 259 2.8e-53 167.0 Leucine Rich Repeat
XP_057812311.1 Pfam PF00560 LRR_1 Repeat 357 379 2.8e-53 167.0 Leucine Rich Repeat
XP_057812311.1 Pfam PF00560 LRR_1 Repeat 501 523 2.8e-53 167.0 Leucine Rich Repeat
XP_057812311.1 Pfam PF00560 LRR_1 Repeat 549 569 2.8e-53 167.0 Leucine Rich Repeat
XP_057812311.1 Pfam PF13855 LRR_8 Repeat 549 607 1.9e-41 140.3 Leucine rich repeat
XP_057812311.1 Pfam PF00560 LRR_1 Repeat 573 595 2.8e-53 167.0 Leucine Rich Repeat
XP_057812311.1 Pfam PF00560 LRR_1 Repeat 597 619 2.8e-53 167.0 Leucine Rich Repeat
XP_057812311.1 Pfam PF00560 LRR_1 Repeat 626 644 2.8e-53 167.0 Leucine Rich Repeat
XP_057812311.1 Pfam PF00560 LRR_1 Repeat 647 668 2.8e-53 167.0 Leucine Rich Repeat
XP_057812311.1 Pfam PF00069 Pkinase Domain 802 1067 1.9e-43 149.5 Protein kinase domain
XP_057812311.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 804 1070 1.1e-41 143.6 Protein tyrosine and serine/threonine kinase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA
XM_057956326.1
CCAAGGATGCCAAACACAACACTGAAAGTCACAAAAAGTAGGCAAAGAAAGATAAGTTCCAATTCAGTCATCCACTAACCCACCTTCCTCACCATAGTCTTGATGCAAATCATCGCAGTTCCATCACTCATCACAACACTACAAAATACTACAACTCTCTTCAAAAAAACAAAAAAGAAATAAAAATCCCATCTTGTCAAAAATGTCATCCCACATTTACAGAGGCAGAAAACAATGGCAAGAGATTGTAATCCTAGTAT...
XM_057956325.1
CCAAGGATGCCAAACACAACACTGAAAGTCACAAAAAGTAGGCAAAGAAAGATAAGTTCCAATTCAGTCATCCACTAACCCACCTTCCTCACCATAGTCTTGATGCAAATCATCGCAGTTCCATCACTCATCACAACACTACAAAATACTACAACTCTCTTCAAAAAAACAAAAAAGAAATAAAAATCCCATCTTGTCAAAAATGTCATCCCACATTTACAGAGGCAGAAAACAATGGCAAGAGATTGTAATCCTAGTAT...

CDS

4 records

下载 CDS FASTA
LOC131026455
ATGGGAGGGCACAAGATTTTGCATTTGACAATAATGTTTTGCTGCATACTTGTTTCTGTTCAATCATTGAATGAAGAGGGAACTATTCTTTTGGAATTCAAGAATTCCCTTAGTGATCCTTACCTTAATCTCCAAAACTGGAATTCCATGGATTCCAATCCCTGCAACTGGACAGGCATAGGCTGTAGCTCCAATAATATTAAGGTAGTTGTCTCTGTGAATCTTAGTGGCTTCAACTTGTCTGGCAATTTGTCTTCTGC...
LOC131026455
ATGGGAGGGCACAAGATTTTGCATTTGACAATAATGTTTTGCTGCATACTTGTTTCTGTTCAATCATTGAATGAAGAGGGAACTATTCTTTTGGAATTCAAGAATTCCCTTAGTGATCCTTACCTTAATCTCCAAAACTGGAATTCCATGGATTCCAATCCCTGCAACTGGACAGGCATAGGCTGTAGCTCCAATAATATTAAGGTAGTTGTCTCTGTGAATCTTAGTGGCTTCAACTTGTCTGGCAATTTGTCTTCTGC...

Protein

4 records

下载 Protein FASTA
XP_057812308.1
MGGHKILHLTIMFCCILVSVQSLNEEGTILLEFKNSLSDPYLNLQNWNSMDSNPCNWTGIGCSSNNIKVVVSVNLSGFNLSGNLSSAICKLPHLTMLNVSRNLISGPIPYDFNCFQNLQVLDLCTNRLHCEFPSQLCNITSLKEMYLCENYLFGGIPNEIGNLVSLEELVIYSNNLTGEIPSSIGQLRSLRIIRAGRNLLSGPLPVEISKCESLAMLGLAENQLEGPFPSQLQSLKFLTTVILWNNHFSGEIPPDIGNFT...
XP_057812309.1
MGGHKILHLTIMFCCILVSVQSLNEEGTILLEFKNSLSDPYLNLQNWNSMDSNPCNWTGIGCSSNNIKVVVSVNLSGFNLSGNLSSAICKLPHLTMLNVSRNLISGPIPYDFNCFQNLQVLDLCTNRLHCEFPSQLCNITSLKEMYLCENYLFGGIPNEIGNLVSLEELVIYSNNLTGEIPSSIGQLRSLRIIRAGRNLLSGPLPVEISKCESLAMLGLAENQLEGPFPSQLQSLKFLTTVILWNNHFSGEIPPDIGNFT...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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