Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G002725`

染色体: Chr05 坐标: 31352926-31358774 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G002725`
名称	SmilChr05G002725
描述	kinesin-like protein KIN-14Q
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	31352926 - 31358774 / `-`

ID 对照

NCBI Gene ID	`LOC131026460`
GeneID	`131026460`
locus_tag	`-`
NCBI Name	`LOC131026460`
原始查询	`SmilChr05G002725`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	kinesin-like protein KIN-14Q
产物	kinesin-like protein KIN-14Q
Arabidopsis	`AT1G72250` (AT1G72250) Di-glucose binding protein with Kinesin motor domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:843557] identity=53; qcov=1.06; evalue=0; confidence=high
Rice	`Os03g0114000` - identity=68.1; qcov=0.366; evalue=0; confidence=low
GO	GO:0003777 (microtubule motor activity); GO:0005524 (ATP binding); GO:0007018 (microtubule-based movement); GO:0008017 (microtubule binding)
KEGG	-
Pfam	PF00225 (Kinesin); PF11721 (Malectin); PF16796 (Microtub_bd)
InterPro	-
eggNOG	-
NR	GeneID:131026460

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoskeleton	细胞骨架	0.80000	`XP_057812316.1`
2	Phragmoplast	Phragmoplast	0.80000	`XP_057812316.1`
3	Cytosol	细胞质基质	0.80000	`XP_057812316.1`
4	Chromosome	染色体	0.60000	`XP_057812317.1`
5	Nucleus	细胞核	0.40000	`XP_057812316.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:31353365`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	A22,D10
`Chr5:31353384`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr5:31353483`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr5:31353509`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B130,B136,C33
`Chr5:31353512`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C39
`Chr5:31353529`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B108,B130,B136,C33
`Chr5:31353534`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C20
`Chr5:31353621`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C2
`Chr5:31353786`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B94,C35
`Chr5:31354131`	`TCA`	`T`	2bp_deletion	frameshift_variant	1	B124
`Chr5:31354131`	`TCA`	`T`	2bp_deletion	CDS_variant	1	B124
`Chr5:31354758`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B130,B136,C33

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057812316.1

1147 aa

574

1147

Malectin

Microtub_bd

Kinesin

PF11721 Malectin 149-286 aa PF16796 Microtub_bd 467-626 aa PF00225 Kinesin 491-811 aa

XP_057812317.1

1103 aa

552

1103

Malectin

Microtub_bd

Kinesin

PF11721 Malectin 105-242 aa PF16796 Microtub_bd 423-582 aa PF00225 Kinesin 447-767 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057812316.1`	Pfam	`PF11721`	Malectin	Domain	149	286	4.7e-21	76.2	Malectin domain
`XP_057812316.1`	Pfam	`PF16796`	Microtub_bd	Domain	467	626	1.1e-43	149.5	Microtubule binding
`XP_057812316.1`	Pfam	`PF00225`	Kinesin	Domain	491	811	1.2e-113	380.1	Kinesin motor domain
`XP_057812317.1`	Pfam	`PF11721`	Malectin	Domain	105	242	4.3e-21	76.3	Malectin domain
`XP_057812317.1`	Pfam	`PF16796`	Microtub_bd	Domain	423	582	1.1e-43	149.6	Microtubule binding
`XP_057812317.1`	Pfam	`PF00225`	Kinesin	Domain	447	767	1.1e-113	380.3	Kinesin motor domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057956334.1
TCCACCACAACGGCACAACGAAATTAACGGCTTCTCTCTCTCTCTCTCAAGACTATTTCGAATGGAATGACCCACTTCTTATAACTGATGTTTCTTCCCTTCAACATCAAGATCGAAGTCAACTTCATAGTCAAACTCATTGCGAATTGCCGAATTTCTGCAGTTTGGAGAGTTCAATAATGGAGGCCGGAGATGAATCTAGCCCGGCCAAGTTTAACGGCCATGTAGCATTGGGCTTTTCGTTGGCGTCGCCTGATTTA...

XM_057956333.1
CAATATAATGATCCCACTTTTTTCATCTTTTTCCCTTGAAACGGAACGAGTGTAATAAGTACTCTTTTAATATTTGTTTTCAATTTTTTGGGAGGTTTTTCAAATCTTAAAAAGAAACTGGTCCTTTATCAATGGCAGATTTCGAATGGAATGACCCACTTCTTATAACTGATGTTTCTTCCCTTCAACATCAAGATCGAAGTCAACTTCATAGTCAAACTCATTGCGAATTGCCGAATTTCTGCAGTTTGGAGAGTTCA...

CDS

2 records

下载 CDS FASTA

LOC131026460
ATGGCAGATTTCGAATGGAATGACCCACTTCTTATAACTGATGTTTCTTCCCTTCAACATCAAGATCGAAGTCAACTTCATAGTCAAACTCATTGCGAATTGCCGAATTTCTGCAGTTTGGAGAGTTCAATAATGGAGGCCGGAGATGAATCTAGCCCGGCCAAGTTTAACGGCCATGTAGCATTGGGCTTTTCGTTGGCGTCGCCTGATTTAGTATGCGTTGGATCACCTGATTTTACTAACCAAAGATATGAGGAATC...

LOC131026460
ATGGAGGCCGGAGATGAATCTAGCCCGGCCAAGTTTAACGGCCATGTAGCATTGGGCTTTTCGTTGGCGTCGCCTGATTTAGTATGCGTTGGATCACCTGATTTTACTAACCAAAGATATGAGGAATCGCCTGAATGTTTGTTGGGTGAAAGAGTTGATGTCTCTTTAGAAAATGGAATTGAGGGTTCTGAGATGAGGACCTCCTTTGAGGCCCCAGCTGCAAAGATGGAAGATTTGCTTGCTGAAGCTTCTTTTGAGCT...

Protein

2 records

下载 Protein FASTA

XP_057812316.1
MADFEWNDPLLITDVSSLQHQDRSQLHSQTHCELPNFCSLESSIMEAGDESSPAKFNGHVALGFSLASPDLVCVGSPDFTNQRYEESPECLLGERVDVSLENGIEGSEMRTSFEAPAAKMEDLLAEASFELATMPLVEGDLMKPSTSSLGINVGSTRSVEFEGGLHFSEDSTFNGGYAVSTEDPVLGDVEGLSLYQTARCGEFSYHFQNLEAGNYVVDLHFAEIVFTAGPSGTRVFDVFLQGKKVVSCLDIYEKVGSHVP...

XP_057812317.1
MEAGDESSPAKFNGHVALGFSLASPDLVCVGSPDFTNQRYEESPECLLGERVDVSLENGIEGSEMRTSFEAPAAKMEDLLAEASFELATMPLVEGDLMKPSTSSLGINVGSTRSVEFEGGLHFSEDSTFNGGYAVSTEDPVLGDVEGLSLYQTARCGEFSYHFQNLEAGNYVVDLHFAEIVFTAGPSGTRVFDVFLQGKKVVSCLDIYEKVGSHVPLVISDLQAYIDGGDGLSIRFEGVIGVPIVSGIFIRKHSCLGEVE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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