Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G002759`

染色体: Chr05 坐标: 31938782-31944492 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G002759`
名称	SmilChr05G002759
描述	mitogen-activated protein kinase 19
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	31938782 - 31944492 / `+`

ID 对照

NCBI Gene ID	`LOC130986846`
GeneID	`130986846`
locus_tag	`-`
NCBI Name	`LOC130986846`
原始查询	`SmilChr05G002759`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	mitogen-activated protein kinase 19
产物	mitogen-activated protein kinase 19
Arabidopsis	`AT3G14720` (MPK19) MAP kinase 19 [Source:NCBI gene (formerly Entrezgene);Acc:820700] identity=78.5; qcov=0.899; evalue=0; confidence=high
Rice	`Os01g0665200` (OsMPK20-4) - identity=77.3; qcov=0.86; evalue=0; confidence=high
GO	GO:0004707 (MAP kinase activity); GO:0005524 (ATP binding); GO:0005634 (nucleus); GO:0005737 (cytoplasm); GO:0006468 (protein phosphorylation); GO:0035556 (intracellular signal transduction)
KEGG	-
Pfam	PF00069 (Pkinase); PF06293 (Kdo); PF07714 (PK_Tyr_Ser-Thr)
InterPro	-
eggNOG	-
NR	GeneID:130986846

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057766363.1`
2	Cytosol	细胞质基质	0.60000	`XP_057766364.1`
3	Nucleus	细胞核	0.40000	`XP_057766364.1`
4	Chromosome	染色体	0.00000	`XP_057766363.1`
5	Centromere	着丝粒	0.00000	`XP_057766363.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:31940208`	`T`	`TTA`	2bp_insertion	frameshift_variant	248	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B111,B112,B113,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B71,B72,B73,B74,B75,B76,B77,B78,B8,B80,B81,B82,B83,B84,B85,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
`Chr5:31940210`	`ACT`	`A`	2bp_deletion	frameshift_variant	248	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B111,B112,B113,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B71,B72,B73,B74,B75,B76,B77,B78,B8,B80,B81,B82,B83,B84,B85,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
`Chr5:31940244`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B111,B137
`Chr5:31940313`	`T`	`TGA`	2bp_insertion	frameshift_variant	188	A10,A11,A13,A14,A15,A16,A18,A19,A20,A23,A25,A3,A4,B1,B10,B100,B102,B103,B105,B106,B107,B108,B109,B11,B110,B113,B117,B118,B12,B120,B121,B124,B125,B127,B128,B129,B130,B131,B132,B135,B138,B139,B14,B15,B16,B17,B19,B2,B20,B22,B23,B24,B25,B27,B28,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B45,B46,B47,B49,B5,B50,B54,B55,B56,B58,B59,B6,B60,B61,B63,B64,B65,B67,B69,B7,B71,B72,B75,B76,B77,B78,B83,B84,B88,B9,B90,B91,B92,B93,B94,B95,B96,B98,B99,C1,C10,C11,C12,C13,C14,C15,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C30,C31,C32,C33,C34,C35,C37,C38,C39,C4,C40,C41,C43,C45,C46,C47,C5,C50,C51,C55,C56,C57,C58,C59,C6,C60,C61,C62,C64,C65,C66,C67,C7,C70,C71,C73,C75,C76,C79,C8,C80,C81,C82,C83,C84,C85,C87,D1,D10,D11,D2,D3,D4,D5,D6,D8,D9
`Chr5:31940315`	`TTG`	`T`	2bp_deletion	frameshift_variant	186	A10,A11,A13,A14,A15,A18,A19,A20,A23,A25,A3,A4,B1,B10,B100,B102,B103,B105,B106,B107,B108,B109,B11,B110,B113,B117,B118,B12,B120,B121,B124,B125,B127,B128,B129,B130,B131,B132,B135,B138,B139,B14,B15,B16,B17,B19,B2,B20,B22,B23,B24,B25,B27,B28,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B45,B46,B47,B49,B5,B50,B52,B54,B55,B56,B58,B59,B6,B60,B61,B63,B65,B67,B69,B7,B71,B72,B75,B76,B77,B78,B83,B84,B88,B9,B90,B91,B92,B93,B94,B95,B96,B98,B99,C1,C10,C11,C12,C13,C15,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C30,C31,C32,C33,C34,C35,C37,C38,C39,C4,C40,C41,C43,C45,C46,C47,C5,C50,C51,C55,C56,C57,C58,C59,C6,C60,C61,C62,C64,C65,C66,C67,C7,C70,C71,C73,C75,C76,C79,C8,C80,C81,C82,C83,C84,C85,C87,D1,D10,D11,D2,D3,D4,D5,D6,D8,D9
`Chr5:31940712`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A6,B112
`Chr5:31941947`	`AAG`	`A`	2bp_deletion	frameshift_variant	6	B131,B15,B88,C22,C58,C82
`Chr5:31942383`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B13
`Chr5:31943137`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B33
`Chr5:31943174`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B13
`Chr5:31943899`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B33
`Chr5:31943925`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C74

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057766363.1

614 aa

307

614

Pkinase

PK_Tyr_Ser-Thr

Kdo

PF00069 Pkinase 26-317 aa PF07714 PK_Tyr_Ser-Thr 28-244 aa PF06293 Kdo 59-164 aa

XP_057766364.1

507 aa

254

507

Pkinase

PK_Tyr_Ser-Thr

Kdo

PF00069 Pkinase 26-317 aa PF07714 PK_Tyr_Ser-Thr 28-244 aa PF06293 Kdo 59-164 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057766363.1`	Pfam	`PF00069`	Pkinase	Domain	26	317	1.1e-64	219.1	Protein kinase domain
`XP_057766363.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	28	244	9.3e-31	107.8	Protein tyrosine and serine/threonine kinase
`XP_057766363.1`	Pfam	`PF06293`	Kdo	Family	59	164	1.8e-05	25.0	Lipopolysaccharide kinase (Kdo/WaaP) family
`XP_057766364.1`	Pfam	`PF00069`	Pkinase	Domain	26	317	7.3e-65	219.7	Protein kinase domain
`XP_057766364.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	28	244	6.5e-31	108.3	Protein tyrosine and serine/threonine kinase
`XP_057766364.1`	Pfam	`PF06293`	Kdo	Family	59	164	2e-05	24.9	Lipopolysaccharide kinase (Kdo/WaaP) family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057910380.1
AACGGTTACCATTACTTATTTCATTTCGATAAAACTTAAACATTAGTATTAAATTAAATAAAATTATAAAAATAAAAAACAAAGGAAATTCCGAAAACACGCAAAGCCACATACTTGTGCCTTTTTATTCCATTTGTATGCAATCACTTGAGCTTCTCCTTCTTCATTTCTCTTTTGCGCTCGCTCTCTCATATCTACGCTCCCCTTTATCTCTCGCTTCACATTTCCAAACCCTAATATTACTCCAACTTTCACAAATT...

XM_057910381.1
TTGTGCCTTTTTATTCCATTTGTATGCAATCACTTGAGCTTCTCCTTCTTCATTTCTCTTTTGCGCTCGCTCTCTCATATCTACGCTCCCCTTTATCTCTCGCTTCACATTTCCAAACCCTAATATTACTCCAACTTTCACAAATTTGCTCATTCCGGGGATAATTGAGGGCGAATTTTGTCGCCGTGTAGTACCAGTGGCGATGGTGCAGTGCAAATGCAGTTTCTGTACTTGATTTCTCGTTACTAAATAGTTCGACG...

CDS

2 records

下载 CDS FASTA

LOC130986846
ATGCCGCAGCAAGATCAAGGAAAGAAGATCCTGAAGGAGGCAGAATTCTTTACCGACTATGGAGATGCAAATAGATATAAAATTCTAGAAATTATTGGAAAGGGTAGCTATGGAGTTGTTTGTGCTGCAATTGATACACATACTGGAGGAAAAGTAGCTATAAAGAAAATAACTGACATTTTTGAGCATATGTCTGATGCAATTCGGATTTTGCGTGAAATTAAGTTGCTTCGCCTGTTACGTCATCCTGATATTGTGGA...

Protein

2 records

下载 Protein FASTA

XP_057766363.1
MPQQDQGKKILKEAEFFTDYGDANRYKILEIIGKGSYGVVCAAIDTHTGGKVAIKKITDIFEHMSDAIRILREIKLLRLLRHPDIVEIKRIILPPSRRDFRDIYVVFELMESDLHQVIKANDDLTHEHHRFFLYQMLRALKYMHTANVFHRDLKPKNILANANCKLKICDFGLARVAFGDTPTTNFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVQQLDLITDLLGTPSSETISGVR...

XP_057766364.1
MPQQDQGKKILKEAEFFTDYGDANRYKILEIIGKGSYGVVCAAIDTHTGGKVAIKKITDIFEHMSDAIRILREIKLLRLLRHPDIVEIKRIILPPSRRDFRDIYVVFELMESDLHQVIKANDDLTHEHHRFFLYQMLRALKYMHTANVFHRDLKPKNILANANCKLKICDFGLARVAFGDTPTTNFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVQQLDLITDLLGTPSSETISGVR...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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