当前解析结果
SmilChr05G002789| 统一新 Gene ID | SmilChr05G002789 |
|---|---|
| 名称 | SmilChr05G002789 |
| 描述 | uncharacterized SmilChr05G002789 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 32605237 - 32608807 / - |
| NCBI Gene ID | LOC130986876 |
|---|---|
| GeneID | 130986876 |
| locus_tag | - |
| NCBI Name | LOC130986876 |
| 原始查询 | SmilChr05G002789 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | craniofacial development protein [Source:NCBI gene (formerly Entrezgene);Acc:841781]; symbol=AT1G53460; hit=AT1G53460; species=arabidopsis; confidence=medium |
| 产物 | craniofacial development protein [Source:NCBI gene (formerly Entrezgene);Acc:841781]; symbol=AT1G53460; hit=AT1G53460; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G53460 (AT1G53460)craniofacial development protein [Source:NCBI gene (formerly Entrezgene);Acc:841781] identity=45.1; qcov=0.493; evalue=5.44e-45; confidence=medium |
| Rice | Os01g0203300- identity=40.5; qcov=0.338; evalue=1.82e-30; confidence=low |
| GO | GO:0003729 (mRNA binding); GO:0005737 (cytoplasm) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130986876 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 0.80000 | XP_057766391.1 |
| 2 | Chloroplast | 叶绿体 | 0.20000 | XP_057766391.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057766391.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057766391.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057766391.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:32605870 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C61 |
Chr5:32606200 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr5:32608033 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr5:32608396 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C83 |
Chr5:32608653 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B109,B65 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。