当前解析结果
SmilChr05G002958| 统一新 Gene ID | SmilChr05G002958 |
|---|---|
| 名称 | SmilChr05G002958 |
| 描述 | uncharacterized SmilChr05G002958 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 35773977 - 35774744 / - |
| NCBI Gene ID | LOC130987018 |
|---|---|
| GeneID | 130987018 |
| locus_tag | - |
| NCBI Name | LOC130987018 |
| 原始查询 | SmilChr05G002958 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | membrane-associated kinase regulator [Source:NCBI gene (formerly Entrezgene);Acc:5007796]; symbol=AT1G53163; hit=AT1G53163; species=arabidopsis; confidence=low |
| 产物 | membrane-associated kinase regulator [Source:NCBI gene (formerly Entrezgene);Acc:5007796]; symbol=AT1G53163; hit=AT1G53163; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G53163 (AT1G53163)membrane-associated kinase regulator [Source:NCBI gene (formerly Entrezgene);Acc:5007796] identity=41; qcov=0.431; evalue=2.77e-06; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130987018 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057766561.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057766561.1 |
| 3 | Cytoplasm | 细胞质 | 0.20000 | XP_057766561.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057766561.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057766561.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:35774282 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B135,B23,B44,B66 |
Chr5:35774417 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B117,B33,B46,C75,C9 |
Chr5:35774438 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B69,B9,C5 |
Chr5:35774495 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A23,B49,B65,C6 |
Chr5:35774566 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B130,B136,C33 |
Chr5:35774641 |
ACT |
A |
2bp_deletion | frameshift_variant | 8 | B119,B133,B15,B24,B84,C41,C77,D5 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。