当前解析结果
SmilChr05G002977| 统一新 Gene ID | SmilChr05G002977 |
|---|---|
| 名称 | SmilChr05G002977 |
| 描述 | uncharacterized SmilChr05G002977 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 36289048 - 36292913 / - |
| NCBI Gene ID | LOC130987034 |
|---|---|
| GeneID | 130987034 |
| locus_tag | - |
| NCBI Name | LOC130987034 |
| 原始查询 | SmilChr05G002977 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:7922432]; symbol=AT1G21722; hit=AT1G21722; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:7922432]; symbol=AT1G21722; hit=AT1G21722; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G21722 (AT1G21722)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:7922432] identity=60.6; qcov=0.776; evalue=2.82e-24; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130987034 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus membrane | 核膜 | 0.80000 | XP_057766580.1 |
| 2 | Endoplasmic reticulum | 内质网 | 0.80000 | XP_057766580.1 |
| 3 | Cytoplasmic vesicle | 细胞质囊泡 | 0.40000 | XP_057766581.1 |
| 4 | Endoplasmic reticulum membrane | 内质网膜 | 0.40000 | XP_057766579.1 |
| 5 | Secreted | 分泌到胞外 | 0.40000 | XP_057766581.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:36289164 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr5:36289207 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr5:36289441 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr5:36289527 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | B76 |
Chr5:36289527 |
GC |
G |
1bp_deletion | CDS_variant | 1 | B76 |
Chr5:36289529 |
AG |
A |
1bp_deletion | frameshift_variant | 1 | B76 |
Chr5:36289529 |
AG |
A |
1bp_deletion | CDS_variant | 1 | B76 |
Chr5:36289624 |
A |
AT |
1bp_insertion | frameshift_variant | 1 | B15 |
Chr5:36289624 |
A |
AT |
1bp_insertion | CDS_variant | 1 | B15 |
Chr5:36292848 |
G |
GA |
1bp_insertion | frameshift_variant | 1 | B23 |
Chr5:36292848 |
G |
GA |
1bp_insertion | CDS_variant | 1 | B23 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
5 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。