Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G003038`

染色体: Chr05 坐标: 38130046-38135401 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G003038`
名称	SmilChr05G003038
描述	protein METABOLIC NETWORK MODULATOR 1-like
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	38130046 - 38135401 / `+`

ID 对照

NCBI Gene ID	`LOC131024325`
GeneID	`131024325`
locus_tag	`-`
NCBI Name	`LOC131024325`
原始查询	`SmilChr05G003038`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	protein METABOLIC NETWORK MODULATOR 1-like
产物	protein METABOLIC NETWORK MODULATOR 1-like
Arabidopsis	`AT5G54930` (AT5G54930) AT hook motif-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:835584] identity=34.2; qcov=0.895; evalue=1.25e-31; confidence=low
Rice	`-` -
GO	-
KEGG	-
Pfam	PF27637 (MNM1_beta)
InterPro	-
eggNOG	-
NR	GeneID:131024325

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057809815.1`
2	Chromosome	染色体	0.00000	`XP_057809815.1`
3	Centromere	着丝粒	0.00000	`XP_057809815.1`
4	Chromatin	染色质	0.00000	`XP_057809815.1`
5	Telomere	端粒	0.00000	`XP_057809815.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:38134182`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B23,B44,C24,C3
`Chr5:38134576`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A5,B13,B4,C19,C60
`Chr5:38134924`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A5,C61
`Chr5:38135149`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B94

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057809815.1

333 aa

166

333

MNM1_beta

PF27637 MNM1_beta 65-101 aa

XP_057809816.1

333 aa

166

333

MNM1_beta

PF27637 MNM1_beta 65-101 aa

XP_057809817.1

333 aa

166

333

MNM1_beta

PF27637 MNM1_beta 65-101 aa

XP_057809818.1

333 aa

166

333

MNM1_beta

PF27637 MNM1_beta 65-101 aa

XP_057809819.1

333 aa

166

333

MNM1_beta

PF27637 MNM1_beta 65-101 aa

XP_057809820.1

333 aa

166

333

MNM1_beta

PF27637 MNM1_beta 65-101 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057809815.1`	Pfam	`PF27637`	MNM1_beta	Domain	65	101	1.6e-20	73.1	Metabolic network modulator 1 small beta sheet domain
`XP_057809816.1`	Pfam	`PF27637`	MNM1_beta	Domain	65	101	1.6e-20	73.1	Metabolic network modulator 1 small beta sheet domain
`XP_057809817.1`	Pfam	`PF27637`	MNM1_beta	Domain	65	101	1.6e-20	73.1	Metabolic network modulator 1 small beta sheet domain
`XP_057809818.1`	Pfam	`PF27637`	MNM1_beta	Domain	65	101	1.6e-20	73.1	Metabolic network modulator 1 small beta sheet domain
`XP_057809819.1`	Pfam	`PF27637`	MNM1_beta	Domain	65	101	1.6e-20	73.1	Metabolic network modulator 1 small beta sheet domain
`XP_057809820.1`	Pfam	`PF27637`	MNM1_beta	Domain	65	101	1.6e-20	73.1	Metabolic network modulator 1 small beta sheet domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

6 records

下载 cDNA FASTA

XM_057953836.1
GACATACGGTTTAAATCAAATTATGAACATCTTGGTAGTGGTAGCTGTTAGGAAGTACTCCATATTTTAGACTACGTTTTGATAATTTGATTCATCCTTGTATCTCACCACAAACAACGATTTTAATTAAAATTCAACGAGTAATGAATGCGCTAATTTTTTTAAAAAAAATAAAGATAAATTCAAGCACTCGATTCACTCATTAGAAGTTTATACTCAACTCTTTTTAAGGTTTTATCCCCTAAAAAAAATCTTTTAGG...

XM_057953834.1
ATTTTAATTAAAATTCAACGAGTAATGAATGCGCTAATTTTTTTAAAAAAAATAAAGATAAATTCAAGCACTCGATTCACTCATTAGAAGTTTATACTCAACTCTTTTTAAGGTTTTATCCCCTAAAAAAAATCTTTTAGGGTTTAATAAAAAAGAATAATTCTGAACTATGGTTCAGCTTCGTTGAATAAGCAATAATTTGAACTTAGAAAATCCTCGCCAGGGCTTCGAGCCAACCTTTTCCAGCAAATAGAGAAGGA...

CDS

6 records

下载 CDS FASTA

LOC131024325
ATGAATCTACTTGATGAAGGGGAGAGCTCTGGCTTGTTGATCCAGCCAGCAAAGCGGAGACGTGGTCGTCCACGTAAAGATGCAAGCTTAAAGCCTGCTGGAGCAGCTCATACGCCTGGTTCTGAAGGAGGCATAGCTTACCTTTCTCAGAGAACCAACAGAACAAGGGAAACAGAATGTATGGTGGGCCAGGCAGTAACTGGTTTTGTTGAAGCCACATTCGACTCTGGCTATCTGCTTACTGTTAGAATTGGCAACTC...

Protein

6 records

下载 Protein FASTA

XP_057809815.1
MNLLDEGESSGLLIQPAKRRRGRPRKDASLKPAGAAHTPGSEGGIAYLSQRTNRTRETECMVGQAVTGFVEATFDSGYLLTVRIGNSSTNLRGVVFKPGHCAPITAENDVAPHAQMIRRSDVRFTFENQSQSPGLGIDMRTSAAVVPSKHKHAPPGRAPAAPSVSAVAPVAPQPITHASYDNGDADVHMVEPLSMLPPVGQVFVPMQPYPSCQVAPGIQQRDDGSFHKGTPIDIDAKSPSQTSDTKIMESLKSSPENSAV...

XP_057809816.1
MNLLDEGESSGLLIQPAKRRRGRPRKDASLKPAGAAHTPGSEGGIAYLSQRTNRTRETECMVGQAVTGFVEATFDSGYLLTVRIGNSSTNLRGVVFKPGHCAPITAENDVAPHAQMIRRSDVRFTFENQSQSPGLGIDMRTSAAVVPSKHKHAPPGRAPAAPSVSAVAPVAPQPITHASYDNGDADVHMVEPLSMLPPVGQVFVPMQPYPSCQVAPGIQQRDDGSFHKGTPIDIDAKSPSQTSDTKIMESLKSSPENSAV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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