当前解析结果
SmilChr05G003227| 统一新 Gene ID | SmilChr05G003227 |
|---|---|
| 名称 | SmilChr05G003227 |
| 描述 | uncharacterized SmilChr05G003227 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 41417630 - 41424729 / + |
| NCBI Gene ID | LOC131024466 |
|---|---|
| GeneID | 131024466 |
| locus_tag | - |
| NCBI Name | LOC131024466 |
| 原始查询 | SmilChr05G003227 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Chaperone DnaJ-domain superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:843238]; symbol=AT1G69060; hit=AT1G69060; species=arabidopsis; confidence=low |
| 产物 | Chaperone DnaJ-domain superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:843238]; symbol=AT1G69060; hit=AT1G69060; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G69060 (AT1G69060)Chaperone DnaJ-domain superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:843238] identity=63.9; qcov=0.309; evalue=2.42e-58; confidence=low |
| Rice | Os03g0752700 (OsDjC33)- identity=59.4; qcov=0.307; evalue=1.46e-49; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131024466 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057809957.1 |
| 2 | Nucleoplasm | 核质 | 0.40000 | XP_057809957.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057809957.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057809957.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057809957.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:41418535 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B1,B2,B37 |
Chr5:41418734 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B108,B122,B99,C35 |
Chr5:41418950 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A5,C60 |
Chr5:41418977 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A5,B121,C4,C60 |
Chr5:41419088 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B112,C44,C86 |
Chr5:41419148 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A5,B121,C4,C60 |
Chr5:41419415 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B112,B91 |
Chr5:41419962 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B38,B39 |
Chr5:41420230 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A10,B50,C83 |
Chr5:41420295 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。