Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G003324`

染色体: Chr05 坐标: 43541546-43547198 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G003324`
名称	SmilChr05G003324
描述	cation/H(+) antiporter 18-like
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	43541546 - 43547198 / `-`

ID 对照

NCBI Gene ID	`LOC131024672`
GeneID	`131024672`
locus_tag	`-`
NCBI Name	`LOC131024672`
原始查询	`SmilChr05G003324`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	cation/H(+) antiporter 18-like
产物	cation/H(+) antiporter 18-like
Arabidopsis	`AT5G41610` (CHX18) cation/H+ exchanger 18 [Source:NCBI gene (formerly Entrezgene);Acc:834163] identity=65.7; qcov=1.01; evalue=0; confidence=high
Rice	`Os05g0276100` (OsCHX14) - identity=64.1; qcov=0.964; evalue=0; confidence=high
GO	GO:0006885 (regulation of pH); GO:0012505 (endomembrane system); GO:0015297 (antiporter activity); GO:0016020 (membrane); GO:1902600 (proton transmembrane transport)
KEGG	-
Pfam	PF00999 (Na_H_Exchanger); PF23256 (CHX17_2nd); PF23259 (CHX17_C)
InterPro	-
eggNOG	-
NR	GeneID:131024672

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057810164.1`
2	Nucleus	细胞核	0.00000	`XP_057810164.1`
3	Chromosome	染色体	0.00000	`XP_057810164.1`
4	Centromere	着丝粒	0.00000	`XP_057810164.1`
5	Chromatin	染色质	0.00000	`XP_057810164.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:43541890`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B15,B23
`Chr5:43541914`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B15,B23
`Chr5:43542295`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B122
`Chr5:43542340`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr5:43542343`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B104,B75
`Chr5:43542436`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C82
`Chr5:43543176`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B55
`Chr5:43545287`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B40
`Chr5:43545296`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B108,B122,B21,C35,D10
`Chr5:43545338`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B108,B122,B21,C35,D10
`Chr5:43545428`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A23,B44,B65,C42

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057810164.1

801 aa

400

801

Na_H_Exchanger

CHX17_2nd

CHX17_C

PF00999 Na_H_Exchanger 43-424 aa PF23256 CHX17_2nd 485-611 aa PF23259 CHX17_C 625-769 aa

XP_057810165.1

801 aa

400

801

Na_H_Exchanger

CHX17_2nd

CHX17_C

PF00999 Na_H_Exchanger 43-424 aa PF23256 CHX17_2nd 485-611 aa PF23259 CHX17_C 625-769 aa

XP_057810166.1

801 aa

400

801

Na_H_Exchanger

CHX17_2nd

CHX17_C

PF00999 Na_H_Exchanger 43-424 aa PF23256 CHX17_2nd 485-611 aa PF23259 CHX17_C 625-769 aa

XP_057810167.1

801 aa

400

801

Na_H_Exchanger

CHX17_2nd

CHX17_C

PF00999 Na_H_Exchanger 43-424 aa PF23256 CHX17_2nd 485-611 aa PF23259 CHX17_C 625-769 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057810164.1`	Pfam	`PF00999`	Na_H_Exchanger	Domain	43	424	3.3e-65	221.1	Sodium/hydrogen exchanger, transmembrane
`XP_057810164.1`	Pfam	`PF23256`	CHX17_2nd	Domain	485	611	3.1e-43	147.6	Plant cation/H(+) antiporter domain
`XP_057810164.1`	Pfam	`PF23259`	CHX17_C	Domain	625	769	1.6e-25	90.7	Plant cation/H(+) antiporter, C-terminal domain
`XP_057810165.1`	Pfam	`PF00999`	Na_H_Exchanger	Domain	43	424	3.3e-65	221.1	Sodium/hydrogen exchanger, transmembrane
`XP_057810165.1`	Pfam	`PF23256`	CHX17_2nd	Domain	485	611	3.1e-43	147.6	Plant cation/H(+) antiporter domain
`XP_057810165.1`	Pfam	`PF23259`	CHX17_C	Domain	625	769	1.6e-25	90.7	Plant cation/H(+) antiporter, C-terminal domain
`XP_057810166.1`	Pfam	`PF00999`	Na_H_Exchanger	Domain	43	424	3.3e-65	221.1	Sodium/hydrogen exchanger, transmembrane
`XP_057810166.1`	Pfam	`PF23256`	CHX17_2nd	Domain	485	611	3.1e-43	147.6	Plant cation/H(+) antiporter domain
`XP_057810166.1`	Pfam	`PF23259`	CHX17_C	Domain	625	769	1.6e-25	90.7	Plant cation/H(+) antiporter, C-terminal domain
`XP_057810167.1`	Pfam	`PF00999`	Na_H_Exchanger	Domain	43	424	3.3e-65	221.1	Sodium/hydrogen exchanger, transmembrane
`XP_057810167.1`	Pfam	`PF23256`	CHX17_2nd	Domain	485	611	3.1e-43	147.6	Plant cation/H(+) antiporter domain
`XP_057810167.1`	Pfam	`PF23259`	CHX17_C	Domain	625	769	1.6e-25	90.7	Plant cation/H(+) antiporter, C-terminal domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XM_057954181.1
ATCACAATATTGGATTTTGAATATACTCAAAGGTTGAGAAAAAAATATACAGAAATTGTGTTTAAAATATAGAATTGCAAATATGATCTTACACAATAAATAAATATTTTAAAGTTTGAAGTGAATAGAATTAAGAGAGGAGGGCAATAATGGAAAGTACCCATTTTCGCGGGTCTACAAAATTGCGTGCAACGCTGCGACGAGCGCCCCTGGCGCAATTTCAAACCCAATATTTCCTCAATCTCTGGAACGTCAGCGCT...

XM_057954183.1
ATCACAATATTGGATTTTGAATATACTCAAAGGTTGAGAAAAAAATATACAGAAATTGTGTTTAAAATATAGAATTGCAAATATGATCTTACACAATAAATAAATATTTTAAAGTTTGAAGTGAATAGAATTAAGAGAGGAGGGCAATAATGGAAAGTACCCATTTTCGCGGGTCTACAAAATTGCGTGCAACGCTGCGACGAGCGCCCCTGGCGCAATTTCAAACCCAATATTTCCTCAATCTCTGGAACGTCAGCGCT...

CDS

4 records

下载 CDS FASTA

LOC131024672
ATGGCTTCAAACGCGACTGTCAAATGTCTACCACCGATGAAGGCCACCTCAAATGGGGTCTTCCAAGGGGATGATCCTCTCCATTTCGCACTTCCTCTTTTGATTATACAGATATGCATTGTGCTGGCGTTGACCCGAATACTAGCATTTCTTCTCCGGCCACTAAGGCAGCCTCGCGTCATTGCAGAGATTGTTGGAGGTGTTCTCCTTGGTCCTTCGGCTTTGGGCCGGAACCAGAAATATCTTAATGCTATTTTTCC...

Protein

4 records

下载 Protein FASTA

XP_057810164.1
MASNATVKCLPPMKATSNGVFQGDDPLHFALPLLIIQICIVLALTRILAFLLRPLRQPRVIAEIVGGVLLGPSALGRNQKYLNAIFPPRSLTVLDTLANLGLLFFLFLVGLELDPKSLRQTGKKALSIALAGISLPFGLGVGTSFVLRATISQGVSQGPFLIFMGVALSITAFPVLARILAELKLLTTNVGRIAMSAAAVNDVAAWILLALAVALSGTGHSPLVSLWVFLCGFGFILLCIIVFPFVFKWIARRCPEGETV...

XP_057810165.1
MASNATVKCLPPMKATSNGVFQGDDPLHFALPLLIIQICIVLALTRILAFLLRPLRQPRVIAEIVGGVLLGPSALGRNQKYLNAIFPPRSLTVLDTLANLGLLFFLFLVGLELDPKSLRQTGKKALSIALAGISLPFGLGVGTSFVLRATISQGVSQGPFLIFMGVALSITAFPVLARILAELKLLTTNVGRIAMSAAAVNDVAAWILLALAVALSGTGHSPLVSLWVFLCGFGFILLCIIVFPFVFKWIARRCPEGETV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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