Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G003608`

染色体: Chr05 坐标: 48144936-48156162 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G003608`
名称	SmilChr05G003608
描述	formin-like protein 14
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	48144936 - 48156162 / `-`

ID 对照

NCBI Gene ID	`LOC130987100`
GeneID	`130987100`
locus_tag	`-`
NCBI Name	`LOC130987100`
原始查询	`SmilChr05G003608`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	formin-like protein 14
产物	formin-like protein 14
Arabidopsis	`AT1G31810` (AFH14) Formin Homology 14 [Source:NCBI gene (formerly Entrezgene);Acc:840068] identity=68.5; qcov=0.405; evalue=0; confidence=low
Rice	`Os10g0119300` (OsFH3) - identity=70.4; qcov=0.378; evalue=0; confidence=low
GO	-
KEGG	-
Pfam	PF02181 (FH2); PF10409 (PTEN_C2)
InterPro	-
eggNOG	-
NR	GeneID:130987100

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057766698.1`
2	Cell membrane	细胞膜	0.60000	`XP_057766695.1`
3	Cytoskeleton	细胞骨架	0.40000	`XP_057766701.1`
4	Cytoplasm	细胞质	0.20000	`XP_057766701.1`
5	Nucleus	细胞核	0.00000	`XP_057766695.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:48145476`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B33
`Chr5:48146063`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C80
`Chr5:48146084`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B24,C58,C75
`Chr5:48146089`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B106,C71
`Chr5:48146099`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B24,C58,C75
`Chr5:48147499`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B1,B2,B37
`Chr5:48147502`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B103,B113,B97,C29,C72
`Chr5:48147532`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C82
`Chr5:48147546`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B46,B52,C64,C66
`Chr5:48148941`	`G`	`A`	EMS_canonical_SNV	stop_gained	6	A22,B125,B42,B43,D6,D7
`Chr5:48148983`	`G`	`GT`	1bp_insertion	frameshift_variant	18	A18,B120,B22,B34,B60,B8,B82,B83,B85,B91,C10,C15,C18,C30,C37,C42,C52,C84
`Chr5:48150970`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B104,C32,C35,C68

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057766695.1

1517 aa

758

1517

PTEN_C2

FH2

PF10409 PTEN_C2 219-358 aa PF02181 FH2 1054-1273 aa PF02181 FH2 1305-1457 aa

XP_057766696.1

1517 aa

758

1517

PTEN_C2

FH2

PF10409 PTEN_C2 219-358 aa PF02181 FH2 1054-1273 aa PF02181 FH2 1305-1457 aa

XP_057766697.1

1496 aa

748

1496

PTEN_C2

FH2

PF10409 PTEN_C2 198-337 aa PF02181 FH2 1033-1252 aa PF02181 FH2 1284-1436 aa

XP_057766698.1

1484 aa

742

1484

PTEN_C2

FH2

PF10409 PTEN_C2 219-358 aa PF02181 FH2 1054-1424 aa

XP_057766700.1

1484 aa

742

1484

PTEN_C2

FH2

PF10409 PTEN_C2 219-358 aa PF02181 FH2 1054-1424 aa

XP_057766701.1

1146 aa

573

1146

FH2

PF02181 FH2 683-902 aa PF02181 FH2 934-1086 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057766695.1`	Pfam	`PF10409`	PTEN_C2	Domain	219	358	3.7e-38	131.0	C2 domain of PTEN tumour-suppressor protein
`XP_057766695.1`	Pfam	`PF02181`	FH2	Family	1054	1273	3.2e-115	385.9	Formin Homology 2 Domain
`XP_057766695.1`	Pfam	`PF02181`	FH2	Family	1305	1457	3.2e-115	385.9	Formin Homology 2 Domain
`XP_057766696.1`	Pfam	`PF10409`	PTEN_C2	Domain	219	358	3.7e-38	131.0	C2 domain of PTEN tumour-suppressor protein
`XP_057766696.1`	Pfam	`PF02181`	FH2	Family	1054	1273	3.2e-115	385.9	Formin Homology 2 Domain
`XP_057766696.1`	Pfam	`PF02181`	FH2	Family	1305	1457	3.2e-115	385.9	Formin Homology 2 Domain
`XP_057766697.1`	Pfam	`PF10409`	PTEN_C2	Domain	198	337	3.6e-38	131.0	C2 domain of PTEN tumour-suppressor protein
`XP_057766697.1`	Pfam	`PF02181`	FH2	Family	1033	1252	3.1e-115	386.0	Formin Homology 2 Domain
`XP_057766697.1`	Pfam	`PF02181`	FH2	Family	1284	1436	3.1e-115	386.0	Formin Homology 2 Domain
`XP_057766698.1`	Pfam	`PF10409`	PTEN_C2	Domain	219	358	3.6e-38	131.0	C2 domain of PTEN tumour-suppressor protein
`XP_057766698.1`	Pfam	`PF02181`	FH2	Family	1054	1424	6.7e-122	407.9	Formin Homology 2 Domain
`XP_057766700.1`	Pfam	`PF10409`	PTEN_C2	Domain	219	358	3.6e-38	131.0	C2 domain of PTEN tumour-suppressor protein
`XP_057766700.1`	Pfam	`PF02181`	FH2	Family	1054	1424	6.7e-122	407.9	Formin Homology 2 Domain
`XP_057766701.1`	Pfam	`PF02181`	FH2	Family	683	902	1.5e-115	387.1	Formin Homology 2 Domain
`XP_057766701.1`	Pfam	`PF02181`	FH2	Family	934	1086	1.5e-115	387.1	Formin Homology 2 Domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

6 records

下载 cDNA FASTA

XM_057910713.1
GCGTACATCTTATTCGCCGCCTTCATTCAAATCCTGGCTGAATAGTGTATTCGCCTCAAATTCAATTTCAAATTAGTCCAGAAATTTTTTCAAAATCAACCATCAAAGATGATAAATTGAAACGACACCACACACTGCCGTCAAACGCCGCTTCAGCAGCTCATCGCCACCGTCAGCCGGAATCTCCGGATTTTCTGGACACCTCCGCCACCGCTCACTCGTCCACTCAGTACCTTCCCCCCATACGTATCTGATTAAAT...

XM_057910714.1
CGTACATCTTATTCGCCGCCTTCATTCAAATCCTGGCTGAATAGTGTATTCGCCTCAAATTCAATTTCAAATTAGTCCAGAAATTTTTTCAAAATCAACCATCAAAGATGATAAATTGAAACGACACCACACACTGCCGTCAAACGCCGCTTCAGCAGCTCATCGCCACCGTCAGCCGGAATCTCCGGATTTTCTGGACACCTCCGCCACCGCTCACTCGTCCACTCAATTGGATTGAATTTTGAACTGAGGATTGATTC...

CDS

6 records

下载 CDS FASTA

LOC130987100
ATGCGTGAGGATTTTAGAGTTATTGGATTGAATTTTGAACTGAGGATTGATTCCCACTACAGCATGTCATTACTAAGTAGATTCTTCTACAAAAGGCCCCCAGATGGTTTACTTGAACTTTCCGACAGAGTATATGTTTTTGATTCCTGTTTCTCAACCGAAGTGCTGCCAGATGATATATACCGACTTTACTTGCATGAAATCATTAATGAGTTACATGAGGAATTCCCAGAATCCTCATTTCTCGCATTTAATTTTCG...

Protein

6 records

下载 Protein FASTA

XP_057766695.1
MREDFRVIGLNFELRIDSHYSMSLLSRFFYKRPPDGLLELSDRVYVFDSCFSTEVLPDDIYRLYLHEIINELHEEFPESSFLAFNFREGEKRSQFAEILCEYDVTVMDYPRQYEGCPLLPLSLIHHFLRASESWLSLANFQNVVLIHCERGGWPLLAFVLASFLVFRKLHSGERKTLEMVYREGPKGLLQLLSPLNPFPSQLRYLQYISRRNISPEWPPPERPLSLDCIILRSIPRFDNQKGCRPIVRVFGRNLLSKDGL...

XP_057766696.1
MREDFRVIGLNFELRIDSHYSMSLLSRFFYKRPPDGLLELSDRVYVFDSCFSTEVLPDDIYRLYLHEIINELHEEFPESSFLAFNFREGEKRSQFAEILCEYDVTVMDYPRQYEGCPLLPLSLIHHFLRASESWLSLANFQNVVLIHCERGGWPLLAFVLASFLVFRKLHSGERKTLEMVYREGPKGLLQLLSPLNPFPSQLRYLQYISRRNISPEWPPPERPLSLDCIILRSIPRFDNQKGCRPIVRVFGRNLLSKDGL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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