Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G003614`

染色体: Chr05 坐标: 48241781-48251327 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G003614`
名称	SmilChr05G003614
描述	uncharacterized SmilChr05G003614
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	48241781 - 48251327 / `-`

ID 对照

NCBI Gene ID	`LOC130987105`
GeneID	`130987105`
locus_tag	`-`
NCBI Name	`LOC130987105`
原始查询	`SmilChr05G003614`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	heteroglycan glucosidase 1 [Source:NCBI gene (formerly Entrezgene);Acc:821944]; symbol=HGL1; hit=AT3G23640; species=arabidopsis; confidence=high
产物	heteroglycan glucosidase 1 [Source:NCBI gene (formerly Entrezgene);Acc:821944]; symbol=HGL1; hit=AT3G23640; species=arabidopsis; confidence=high
Arabidopsis	`AT3G23640` (HGL1) heteroglycan glucosidase 1 [Source:NCBI gene (formerly Entrezgene);Acc:821944] identity=72.5; qcov=0.987; evalue=0; confidence=high
Rice	`Os07g0420700` - identity=68.8; qcov=0.986; evalue=0; confidence=high
GO	GO:0004553 (hydrolase activity, hydrolyzing O-glycosyl compounds); GO:0005975 (carbohydrate metabolic process); GO:0030246 (carbohydrate binding)
KEGG	-
Pfam	PF01055 (Glyco_hydro_31_2nd); PF13802 (Gal_mutarotas_2); PF17137 (DUF5110)
InterPro	-
eggNOG	-
NR	GeneID:130987105

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057766709.1`
2	Chloroplast	叶绿体	0.80000	`XP_057766708.1`
3	Cytoplasm	细胞质	0.60000	`XP_057766709.1`
4	Nucleus	细胞核	0.00000	`XP_057766708.1`
5	Chromosome	染色体	0.00000	`XP_057766708.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:48241971`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B136
`Chr5:48242010`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A16,B10
`Chr5:48242027`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A18,B37,C1,C43,C76
`Chr5:48242042`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B17
`Chr5:48242049`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B109,B48
`Chr5:48242050`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C4
`Chr5:48242070`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B35
`Chr5:48242085`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B21,C14,C18,D2
`Chr5:48242141`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A13,B139,C35
`Chr5:48243115`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B109,B137,B48
`Chr5:48243551`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A2,B10,B51,B58,C76
`Chr5:48244023`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B45,C51

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057766708.1

1083 aa

542

1083

Gal_mutarotas_2

Glyco_hydro_31_2nd

DUF5110

PF13802 Gal_mutarotas_2 170-244 aa PF01055 Glyco_hydro_31_2nd 285-614 aa PF17137 DUF5110 716-784 aa

XP_057766709.1

994 aa

497

994

Gal_mutarotas_2

Glyco_hydro_31_2nd

DUF5110

PF13802 Gal_mutarotas_2 81-155 aa PF01055 Glyco_hydro_31_2nd 196-525 aa PF17137 DUF5110 627-695 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057766708.1`	Pfam	`PF13802`	Gal_mutarotas_2	Domain	170	244	1.3e-17	65.4	Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
`XP_057766708.1`	Pfam	`PF01055`	Glyco_hydro_31_2nd	Domain	285	614	1.1e-124	416.7	Glycosyl hydrolases family 31 TIM-barrel domain
`XP_057766708.1`	Pfam	`PF17137`	DUF5110	Family	716	784	4.6e-12	46.5	Domain of unknown function (DUF5110)
`XP_057766709.1`	Pfam	`PF13802`	Gal_mutarotas_2	Domain	81	155	1.1e-17	65.6	Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
`XP_057766709.1`	Pfam	`PF01055`	Glyco_hydro_31_2nd	Domain	196	525	9.3e-125	417.0	Glycosyl hydrolases family 31 TIM-barrel domain
`XP_057766709.1`	Pfam	`PF17137`	DUF5110	Family	627	695	4.1e-12	46.6	Domain of unknown function (DUF5110)

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057910725.1
TAATTAAATAATAATGCGACGTATGTTATACCGGAACCCAGATGGCAAAACCGTCGCACTGCATTCCACCGTCTGTTATTTCATCACACGACCAACACCCTCTACGCCACTCCACTCAATGCTACACTTATGGTTCTAGAATCTTACACGGCTCGCTCAAAAATACTAATTTTCTGAGTTTCCTCAACTTGGAATCTCATTTCAGCAGCAAACCTGTTGCTGGAAGTTCTCTCATTCTTCCGATCAGTTATCCGTCTTAC...

XM_057910726.1
TCATTTCAGCAGCAAACCTGTTGCTGGAAGTTCTCTCATTCTTCCGATCAGTTTCTTGGTATAGTTATCCGTCTTACAGAAAGGTAAAAGTTAGAAGGAGGTTGATTGATCAAAGATCATTAGTAATGTCAAAGATGATTGGGGAGGAAACCGCGTTATGCTCAGAGGCGCGGGCCGGGAAAATGGTTTTTCAGCCAATTCTCGAGGAAGGAGTATTCCGCTTTGATTGTTCTGCAGACGATAGAAATGGTACATTTCCA...

CDS

2 records

下载 CDS FASTA

LOC130987105
ATGGCAAAACCGTCGCACTGCATTCCACCGTCTGTTATTTCATCACACGACCAACACCCTCTACGCCACTCCACTCAATGCTACACTTATGGTTCTAGAATCTTACACGGCTCGCTCAAAAATACTAATTTTCTGAGTTTCCTCAACTTGGAATCTCATTTCAGCAGCAAACCTGTTGCTGGAAGTTCTCTCATTCTTCCGATCAGTTATCCGTCTTACAGAAAGGTAAAAGTTAGAAGGAGGTTGATTGATCAAAGATC...

LOC130987105
ATGTCAAAGATGATTGGGGAGGAAACCGCGTTATGCTCAGAGGCGCGGGCCGGGAAAATGGTTTTTCAGCCAATTCTCGAGGAAGGAGTATTCCGCTTTGATTGTTCTGCAGACGATAGAAATGGTACATTTCCAAGCATTTCATTTGAAAACCCCAGAGTTAGGGACGTGCCACTTGCGGATGTCCATAAAGTTCCAACTTTAGTTCCCAGTTTTGAATGTGTAAAGGGACAGCAAATGGTCAATTTAGAGTTTCCTCA...

Protein

2 records

下载 Protein FASTA

XP_057766708.1
MAKPSHCIPPSVISSHDQHPLRHSTQCYTYGSRILHGSLKNTNFLSFLNLESHFSSKPVAGSSLILPISYPSYRKVKVRRRLIDQRSLVMSKMIGEETALCSEARAGKMVFQPILEEGVFRFDCSADDRNGTFPSISFENPRVRDVPLADVHKVPTLVPSFECVKGQQMVNLEFPQNTSFYGTGEVSGQLERTGRRIFTWNTDAWGYGPGTTSLYQSHPWVLAVLSNGEAIGVLADTTRRCEIDLRKESNIKLISEAPYP...

XP_057766709.1
MSKMIGEETALCSEARAGKMVFQPILEEGVFRFDCSADDRNGTFPSISFENPRVRDVPLADVHKVPTLVPSFECVKGQQMVNLEFPQNTSFYGTGEVSGQLERTGRRIFTWNTDAWGYGPGTTSLYQSHPWVLAVLSNGEAIGVLADTTRRCEIDLRKESNIKLISEAPYPVITFGPFDSPTDVLASFSRAVGTVFMPPKWSLGYHQCRWSYHSDARVREIAKTFREKSIPCDVIWMDIDYMDGFRCFTFDKERFPDPKS...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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