当前解析结果
SmilChr05G003691| 统一新 Gene ID | SmilChr05G003691 |
|---|---|
| 名称 | SmilChr05G003691 |
| 描述 | pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 50033387 - 50041106 / - |
| NCBI Gene ID | LOC130987165 |
|---|---|
| GeneID | 130987165 |
| locus_tag | - |
| NCBI Name | LOC130987165 |
| 原始查询 | SmilChr05G003691 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like |
| 产物 | pentatricopeptide repeat-containing protein At4g19440%2C chloroplastic-like |
| Arabidopsis | AT4G19440 (AT4G19440)Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:827685] identity=47; qcov=0.87; evalue=0; confidence=high |
| Rice | Os08g0290000- identity=37.2; qcov=0.706; evalue=1.42e-144; confidence=medium |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | PF01535 (PPR); PF12854 (PPR_1); PF13041 (PPR_2); PF13812 (PPR_3); PF17177 (PPR_long); PF23276 (TPR_24) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130987165 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057766792.1 |
| 2 | Chloroplast | 叶绿体 | 0.20000 | XP_057766792.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057766792.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057766792.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057766792.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:50038303 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B28,C12,C3,C35,C8 |
Chr5:50038307 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B94 |
Chr5:50038450 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A22,B133 |
Chr5:50038589 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | C12,C3,C35,C8 |
Chr5:50038865 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C2 |
Chr5:50039196 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B53,C24,C3 |
Chr5:50039264 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B30 |
Chr5:50039265 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A1,B72,C50,D11 |
Chr5:50039392 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A2,B44,B70,C78 |
Chr5:50039641 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B13,B136,B41 |
Chr5:50039704 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A22,B56,B96,C38 |
Chr5:50039821 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A21 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057766792.1PF23276
TPR_24 263-365 aa
PF13812
PPR_3 270-319 aa
PF12854
PPR_1 272-303 aa
PF13041
PPR_2 274-323 aa
PF01535
PPR 278-307 aa
PF17177
PPR_long 279-422 aa
PF12854
PPR_1 305-338 aa
PF13041
PPR_2 309-358 aa
PF13812
PPR_3 311-355 aa
PF01535
PPR 312-341 aa
PF01535
PPR 347-377 aa
PF13812
PPR_3 368-424 aa
PF12854
PPR_1 375-408 aa
PF13041
PPR_2 379-428 aa
PF01535
PPR 382-411 aa
PF13812
PPR_3 402-453 aa
PF12854
PPR_1 411-442 aa
PF13041
PPR_2 414-463 aa
PF01535
PPR 417-447 aa
PF01535
PPR 489-510 aa
PF13041
PPR_2 520-568 aa
PF01535
PPR 522-552 aa
PF17177
PPR_long 538-676 aa
PF13812
PPR_3 542-599 aa
PF12854
PPR_1 551-582 aa
PF13041
PPR_2 555-603 aa
PF01535
PPR 557-587 aa
PF12854
PPR_1 585-616 aa
PF13041
PPR_2 589-638 aa
PF01535
PPR 592-621 aa
PF13812
PPR_3 613-671 aa
PF13041
PPR_2 624-670 aa
PF01535
PPR 629-655 aa
PF23276
TPR_24 645-726 aa
PF17177
PPR_long 646-777 aa
PF13812
PPR_3 653-708 aa
PF12854
PPR_1 656-688 aa
PF13041
PPR_2 659-707 aa
PF01535
PPR 662-692 aa
PF13812
PPR_3 682-741 aa
PF13041
PPR_2 697-743 aa
PF01535
PPR 698-727 aa
PF13812
PPR_3 718-776 aa
PF12854
PPR_1 725-758 aa
PF13041
PPR_2 729-778 aa
PF01535
PPR 732-762 aa
PF17177
PPR_long 751-843 aa
PF13812
PPR_3 752-811 aa
PF12854
PPR_1 761-792 aa
PF01535
PPR 767-797 aa
PF13041
PPR_2 768-813 aa
PF12854
PPR_1 795-827 aa
PF13041
PPR_2 799-845 aa
PF01535
PPR 802-832 aa
XP_057766793.1PF23276
TPR_24 263-365 aa
PF13812
PPR_3 270-319 aa
PF12854
PPR_1 272-303 aa
PF13041
PPR_2 274-323 aa
PF01535
PPR 278-307 aa
PF17177
PPR_long 279-422 aa
PF12854
PPR_1 305-338 aa
PF13041
PPR_2 309-358 aa
PF13812
PPR_3 311-355 aa
PF01535
PPR 312-341 aa
PF01535
PPR 347-377 aa
PF13812
PPR_3 368-424 aa
PF12854
PPR_1 375-408 aa
PF13041
PPR_2 379-428 aa
PF01535
PPR 382-411 aa
PF13812
PPR_3 402-453 aa
PF12854
PPR_1 411-442 aa
PF13041
PPR_2 414-463 aa
PF01535
PPR 417-447 aa
PF01535
PPR 489-510 aa
PF13041
PPR_2 520-568 aa
PF01535
PPR 522-552 aa
PF17177
PPR_long 538-676 aa
PF13812
PPR_3 542-599 aa
PF12854
PPR_1 551-582 aa
PF13041
PPR_2 555-603 aa
PF01535
PPR 557-587 aa
PF12854
PPR_1 585-616 aa
PF13041
PPR_2 589-638 aa
PF01535
PPR 592-621 aa
PF13812
PPR_3 613-671 aa
PF13041
PPR_2 624-670 aa
PF01535
PPR 629-655 aa
PF23276
TPR_24 645-726 aa
PF17177
PPR_long 646-777 aa
PF13812
PPR_3 653-708 aa
PF12854
PPR_1 656-688 aa
PF13041
PPR_2 659-707 aa
PF01535
PPR 662-692 aa
PF13812
PPR_3 682-741 aa
PF13041
PPR_2 697-743 aa
PF01535
PPR 698-727 aa
PF13812
PPR_3 718-776 aa
PF12854
PPR_1 725-758 aa
PF13041
PPR_2 729-778 aa
PF01535
PPR 732-762 aa
PF17177
PPR_long 751-843 aa
PF13812
PPR_3 752-811 aa
PF12854
PPR_1 761-792 aa
PF01535
PPR 767-797 aa
PF13041
PPR_2 768-813 aa
PF12854
PPR_1 795-827 aa
PF13041
PPR_2 799-845 aa
PF01535
PPR 802-832 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057766792.1 |
Pfam | PF23276 |
TPR_24 | Repeat | 263 | 365 | 6.2e-39 | 133.7 | Pentatricopeptide repeat-containing protein |
XP_057766792.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 270 | 319 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766792.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 272 | 303 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766792.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 274 | 323 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766792.1 |
Pfam | PF01535 |
PPR | Repeat | 278 | 307 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766792.1 |
Pfam | PF17177 |
PPR_long | Repeat | 279 | 422 | 3.3e-39 | 135.2 | Pentacotripeptide-repeat region of PRORP |
XP_057766792.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 305 | 338 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766792.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 309 | 358 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766792.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 311 | 355 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766792.1 |
Pfam | PF01535 |
PPR | Repeat | 312 | 341 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766792.1 |
Pfam | PF01535 |
PPR | Repeat | 347 | 377 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766792.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 368 | 424 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766792.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 375 | 408 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766792.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 379 | 428 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766792.1 |
Pfam | PF01535 |
PPR | Repeat | 382 | 411 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766792.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 402 | 453 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766792.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 411 | 442 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766792.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 414 | 463 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766792.1 |
Pfam | PF01535 |
PPR | Repeat | 417 | 447 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766792.1 |
Pfam | PF01535 |
PPR | Repeat | 489 | 510 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766792.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 520 | 568 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766792.1 |
Pfam | PF01535 |
PPR | Repeat | 522 | 552 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766792.1 |
Pfam | PF17177 |
PPR_long | Repeat | 538 | 676 | 3.3e-39 | 135.2 | Pentacotripeptide-repeat region of PRORP |
XP_057766792.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 542 | 599 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766792.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 551 | 582 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766792.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 555 | 603 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766792.1 |
Pfam | PF01535 |
PPR | Repeat | 557 | 587 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766792.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 585 | 616 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766792.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 589 | 638 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766792.1 |
Pfam | PF01535 |
PPR | Repeat | 592 | 621 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766792.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 613 | 671 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766792.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 624 | 670 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766792.1 |
Pfam | PF01535 |
PPR | Repeat | 629 | 655 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766792.1 |
Pfam | PF23276 |
TPR_24 | Repeat | 645 | 726 | 6.2e-39 | 133.7 | Pentatricopeptide repeat-containing protein |
XP_057766792.1 |
Pfam | PF17177 |
PPR_long | Repeat | 646 | 777 | 3.3e-39 | 135.2 | Pentacotripeptide-repeat region of PRORP |
XP_057766792.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 653 | 708 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766792.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 656 | 688 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766792.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 659 | 707 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766792.1 |
Pfam | PF01535 |
PPR | Repeat | 662 | 692 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766792.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 682 | 741 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766792.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 697 | 743 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766792.1 |
Pfam | PF01535 |
PPR | Repeat | 698 | 727 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766792.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 718 | 776 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766792.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 725 | 758 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766792.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 729 | 778 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766792.1 |
Pfam | PF01535 |
PPR | Repeat | 732 | 762 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766792.1 |
Pfam | PF17177 |
PPR_long | Repeat | 751 | 843 | 3.3e-39 | 135.2 | Pentacotripeptide-repeat region of PRORP |
XP_057766792.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 752 | 811 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766792.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 761 | 792 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766792.1 |
Pfam | PF01535 |
PPR | Repeat | 767 | 797 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766792.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 768 | 813 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766792.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 795 | 827 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766792.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 799 | 845 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766792.1 |
Pfam | PF01535 |
PPR | Repeat | 802 | 832 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766793.1 |
Pfam | PF23276 |
TPR_24 | Repeat | 263 | 365 | 6.2e-39 | 133.7 | Pentatricopeptide repeat-containing protein |
XP_057766793.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 270 | 319 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766793.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 272 | 303 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766793.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 274 | 323 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766793.1 |
Pfam | PF01535 |
PPR | Repeat | 278 | 307 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766793.1 |
Pfam | PF17177 |
PPR_long | Repeat | 279 | 422 | 3.3e-39 | 135.2 | Pentacotripeptide-repeat region of PRORP |
XP_057766793.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 305 | 338 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766793.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 309 | 358 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766793.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 311 | 355 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766793.1 |
Pfam | PF01535 |
PPR | Repeat | 312 | 341 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766793.1 |
Pfam | PF01535 |
PPR | Repeat | 347 | 377 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766793.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 368 | 424 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766793.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 375 | 408 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766793.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 379 | 428 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766793.1 |
Pfam | PF01535 |
PPR | Repeat | 382 | 411 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766793.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 402 | 453 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766793.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 411 | 442 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766793.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 414 | 463 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766793.1 |
Pfam | PF01535 |
PPR | Repeat | 417 | 447 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766793.1 |
Pfam | PF01535 |
PPR | Repeat | 489 | 510 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766793.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 520 | 568 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766793.1 |
Pfam | PF01535 |
PPR | Repeat | 522 | 552 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766793.1 |
Pfam | PF17177 |
PPR_long | Repeat | 538 | 676 | 3.3e-39 | 135.2 | Pentacotripeptide-repeat region of PRORP |
XP_057766793.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 542 | 599 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766793.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 551 | 582 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766793.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 555 | 603 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766793.1 |
Pfam | PF01535 |
PPR | Repeat | 557 | 587 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766793.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 585 | 616 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766793.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 589 | 638 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766793.1 |
Pfam | PF01535 |
PPR | Repeat | 592 | 621 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766793.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 613 | 671 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766793.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 624 | 670 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766793.1 |
Pfam | PF01535 |
PPR | Repeat | 629 | 655 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766793.1 |
Pfam | PF23276 |
TPR_24 | Repeat | 645 | 726 | 6.2e-39 | 133.7 | Pentatricopeptide repeat-containing protein |
XP_057766793.1 |
Pfam | PF17177 |
PPR_long | Repeat | 646 | 777 | 3.3e-39 | 135.2 | Pentacotripeptide-repeat region of PRORP |
XP_057766793.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 653 | 708 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766793.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 656 | 688 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766793.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 659 | 707 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766793.1 |
Pfam | PF01535 |
PPR | Repeat | 662 | 692 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766793.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 682 | 741 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766793.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 697 | 743 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766793.1 |
Pfam | PF01535 |
PPR | Repeat | 698 | 727 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766793.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 718 | 776 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766793.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 725 | 758 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766793.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 729 | 778 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766793.1 |
Pfam | PF01535 |
PPR | Repeat | 732 | 762 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766793.1 |
Pfam | PF17177 |
PPR_long | Repeat | 751 | 843 | 3.3e-39 | 135.2 | Pentacotripeptide-repeat region of PRORP |
XP_057766793.1 |
Pfam | PF13812 |
PPR_3 | Repeat | 752 | 811 | 1.3e-73 | 243.7 | Pentatricopeptide repeat domain |
XP_057766793.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 761 | 792 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766793.1 |
Pfam | PF01535 |
PPR | Repeat | 767 | 797 | 6.2e-111 | 355.9 | PPR repeat |
XP_057766793.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 768 | 813 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766793.1 |
Pfam | PF12854 |
PPR_1 | Repeat | 795 | 827 | 3.5e-142 | 462.5 | PPR repeat |
XP_057766793.1 |
Pfam | PF13041 |
PPR_2 | Repeat | 799 | 845 | 6.2e-181 | 587.2 | PPR repeat family |
XP_057766793.1 |
Pfam | PF01535 |
PPR | Repeat | 802 | 832 | 6.2e-111 | 355.9 | PPR repeat |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。