当前解析结果
SmilChr05G003737| 统一新 Gene ID | SmilChr05G003737 |
|---|---|
| 名称 | SmilChr05G003737 |
| 描述 | protein KAKU4-like |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 50445181 - 50450666 / - |
| NCBI Gene ID | LOC130987174 |
|---|---|
| GeneID | 130987174 |
| locus_tag | - |
| NCBI Name | LOC130987174 |
| 原始查询 | SmilChr05G003737 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | protein KAKU4-like |
| 产物 | protein KAKU4-like |
| Arabidopsis | AT4G31430 (AT4G31430)flocculation protein [Source:NCBI gene (formerly Entrezgene);Acc:829270] identity=38; qcov=0.573; evalue=5.09e-38; confidence=medium |
| Rice | Os04g0655600- identity=30; qcov=0.324; evalue=1.41e-14; confidence=low |
| GO | GO:0005635 (nuclear envelope); GO:0071763 (nuclear membrane organization) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130987174 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057766801.1 |
| 2 | Nucleus membrane | 核膜 | 1.00000 | XP_057766801.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057766801.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057766801.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057766801.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:50445642 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B27 |
Chr5:50445649 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B28 |
Chr5:50445766 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A18,B65,C1,C38,C43 |
Chr5:50445802 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B48,B98 |
Chr5:50446308 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B63,B86,C29 |
Chr5:50447540 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C76 |
Chr5:50448110 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B41 |
Chr5:50448137 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B41 |
Chr5:50448146 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B55 |
Chr5:50448179 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C79 |
Chr5:50450477 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B24 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
4 records
下载 cDNA FASTA4 records
下载 CDS FASTA4 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。