Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G003879`

染色体: Chr05 坐标: 52441653-52446039 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G003879`
名称	SmilChr05G003879
描述	uncharacterized SmilChr05G003879
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	52441653 - 52446039 / `+`

ID 对照

NCBI Gene ID	`LOC131024932`
GeneID	`131024932`
locus_tag	`-`
NCBI Name	`LOC131024932`
原始查询	`SmilChr05G003879`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	Plant Tudor-like RNA-binding protein [Source:NCBI gene (formerly Entrezgene);Acc:829379]; symbol=AT4G32440; hit=AT4G32440; species=arabidopsis; confidence=low
产物	Plant Tudor-like RNA-binding protein [Source:NCBI gene (formerly Entrezgene);Acc:829379]; symbol=AT4G32440; hit=AT4G32440; species=arabidopsis; confidence=low
Arabidopsis	`AT4G32440` (AT4G32440) Plant Tudor-like RNA-binding protein [Source:NCBI gene (formerly Entrezgene);Acc:829379] identity=33.9; qcov=0.908; evalue=9.8e-33; confidence=low
Rice	`Os02g0204500` (P0544H11.20-1) - identity=37.8; qcov=0.553; evalue=3.92e-25; confidence=medium
GO	-
KEGG	-
Pfam	PF03735 (ENT); PF05641 (Agenet)
InterPro	-
eggNOG	-
NR	GeneID:131024932

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057810475.1`
2	Chromosome	染色体	0.00000	`XP_057810475.1`
3	Centromere	着丝粒	0.00000	`XP_057810475.1`
4	Chromatin	染色质	0.00000	`XP_057810475.1`
5	Telomere	端粒	0.00000	`XP_057810475.1`

进入亚细胞定位查询

EMS 诱变突变

该基因暂未检索到已上线的精选 EMS CDS / LoF 突变，或 EMS 突变库仍在构建。

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057810475.1

428 aa

214

428

Agenet

ENT

PF05641 Agenet 6-62 aa PF03735 ENT 363-418 aa

XP_057810476.1

278 aa

139

278

Agenet

PF05641 Agenet 6-62 aa

XP_057810477.1

273 aa

136

273

Agenet

PF05641 Agenet 6-62 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057810475.1`	Pfam	`PF05641`	Agenet	Domain	6	62	4.1e-11	43.9	Agenet domain
`XP_057810475.1`	Pfam	`PF03735`	ENT	Domain	363	418	3.2e-13	50.2	ENT domain
`XP_057810476.1`	Pfam	`PF05641`	Agenet	Domain	6	62	1.4e-11	45.4	Agenet domain
`XP_057810477.1`	Pfam	`PF05641`	Agenet	Domain	6	62	5.7e-11	43.4	Agenet domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

10 records

下载 cDNA FASTA

XR_009102030.1
AAGGCGTGCATTACGCACACCCTACTTTTTTTCTGGTGTTGATTGAGTTTTGAGCCAACATTTTTATATTCCAATTCTACCCCCACCCCGAATATATATTTTCTTTCTTTATTATTTTATTTTATATATTTTCTTGCCCCAATTTGTTTCTTCAAAGCTCACGAAAACAAACCCTAGACCGTGAAACTGAGGAATAAGAATCTGTTTTTCAGAGAGCATCTGAGATTTGAACCCCCTAATTCGGACTGCGGTGATCGTTT...

XR_009102034.1
AGTTTTGAGCCAACATTTTTATATTCCAATTCTACCCCCACCCCGAATATATATTTTCTTTCTTTATTATTTTATTTTATATATTTTCTTGCCCCAATTTGTTTCTTCAAAGCTCACGAAAACAAACCCTAGACCGTGAAACTGAGGAATAAGAATCTGTTTTTCAGAGAGCATCTGAGATTTGAACCCCCTAATTCGGACTGCGGTGATCGTTTATACCTGTCTAATTTCTCGAAAAGCCTTTTGATATTTGTTAAAGA...

CDS

3 records

下载 CDS FASTA

LOC131024932
ATGAGATTCAAAACTGGGGACGTGGTTGAGGTGATGAAGAGTAGGGAGGTACCAGTTTCATGGCGTGCTGCTGACATACTATCACGTAGCGGGGATACTTATACCATCCAGTATGTTTGCTATCCTGGTATGGCAAATAAGCGGTTGGTGGAGGTGGTTTCAAGGAAGTTATTGAGACCTTGCCCTTCTTCGCTACAAGGGGCGAAGAGTTTCATAACAGGAGACATTGTTGAGGTCTTCCATCAATTTTCCTGGAAGAT...

Protein

3 records

下载 Protein FASTA

XP_057810475.1
MRFKTGDVVEVMKSREVPVSWRAADILSRSGDTYTIQYVCYPGMANKRLVEVVSRKLLRPCPSSLQGAKSFITGDIVEVFHQFSWKIAVVLNVLGGKKESRNNKIHHKVSTCKNRYLVRLLGCSKELAIDRTKIRMRQTWHDGKWVPLTKIPQVGDDVIVSKPSKSNCCPKMNFQVPVFDSRAKYQPAEDCGNIQDEAALRESAVISSRSLKRMSPYISSVVEANNGHVQKFRAAEKEGRKQRVVADRVLEKVHAVAYPK...

XP_057810476.1
MRFKTGDVVEVMKSREVPVSWRAADILSRSGDTYTIQYVCYPGMANKRLVEVVSRKLLRPCPSSLQGAKSFITGDIVEVFHQFSWKIAVVLNVLGGKKESRNNKIHHKVSTCKNRYLVRLLGCSKELAIDRTKIRMRQTWHDGKWVPLTKIPQVGDDVIVSKPSKSNCCPKMNFQVPVFDSRAKYQPAEDCGNIQDEAALRESAVISSRSLKRMSPYISSVVEANNGHVQKFRAAEKEGRKQRVVADRVLEKGYSLRHAS...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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