当前解析结果
SmilChr05G003980| 统一新 Gene ID | SmilChr05G003980 |
|---|---|
| 名称 | SmilChr05G003980 |
| 描述 | uncharacterized SmilChr05G003980 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 53580388 - 53581630 / - |
| NCBI Gene ID | LOC131025049 |
|---|---|
| GeneID | 131025049 |
| locus_tag | - |
| NCBI Name | LOC131025049 |
| 原始查询 | SmilChr05G003980 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:837896]; symbol=AT1G13360; hit=AT1G13360; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:837896]; symbol=AT1G13360; hit=AT1G13360; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G13360 (AT1G13360)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:837896] identity=46.7; qcov=1.05; evalue=8.32e-35; confidence=medium |
| Rice | Os01g0131300- identity=43.6; qcov=0.532; evalue=2.45e-12; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131025049 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057810627.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057810627.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057810627.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057810627.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057810627.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:53580673 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B12,B55 |
Chr5:53580704 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B12,B55 |
Chr5:53580751 |
G |
A |
EMS_canonical_SNV | stop_gained | 18 | A15,A20,A5,B110,B122,B50,B60,B71,B88,B94,C16,C25,C28,C36,C5,C55,C82,C86 |
Chr5:53580778 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B73,C55 |
Chr5:53580809 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D8 |
Chr5:53580864 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A22,C63 |
Chr5:53580867 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A15,C55 |
Chr5:53580901 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B12,B55 |
Chr5:53580908 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B131,B95,D6 |
Chr5:53580912 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B131,B95,D6 |
Chr5:53580944 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B140,C45 |
Chr5:53580975 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。