当前解析结果
SmilChr05G004013| 统一新 Gene ID | SmilChr05G004013 |
|---|---|
| 名称 | SmilChr05G004013 |
| 描述 | uncharacterized SmilChr05G004013 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 54071851 - 54075559 / - |
| NCBI Gene ID | LOC131026124 |
|---|---|
| GeneID | 131026124 |
| locus_tag | - |
| NCBI Name | LOC131026124 |
| 原始查询 | SmilChr05G004013 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | FAD/NAD(P)-binding oxidoreductase family protein [Source:NCBI gene (formerly Entrezgene);Acc:831004]; symbol=AT5G11330; hit=AT5G11330; species=arabidopsis; confidence=high |
| 产物 | FAD/NAD(P)-binding oxidoreductase family protein [Source:NCBI gene (formerly Entrezgene);Acc:831004]; symbol=AT5G11330; hit=AT5G11330; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G11330 (AT5G11330)FAD/NAD(P)-binding oxidoreductase family protein [Source:NCBI gene (formerly Entrezgene);Acc:831004] identity=59.9; qcov=0.734; evalue=1.34e-109; confidence=high |
| Rice | Os06g0597600- identity=53; qcov=0.669; evalue=6.31e-78; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131026124 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 0.80000 | XP_057811876.1 |
| 2 | Cytoplasm | 细胞质 | 0.60000 | XP_057811876.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057811876.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057811876.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057811876.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:54071854 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B22,B69 |
Chr5:54071864 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B4,C20 |
Chr5:54071947 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C47 |
Chr5:54072029 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B111,C25,C6,D3 |
Chr5:54072059 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C73,D6 |
Chr5:54072066 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B111,C25,C6,D3 |
Chr5:54072069 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B128,C43,C49,C71 |
Chr5:54072076 |
TG |
T |
1bp_deletion | frameshift_variant | 12 | A16,B103,B130,B139,B37,C20,C23,C34,C4,C47,C71,C85 |
Chr5:54074543 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B4,B62,C34 |
Chr5:54074546 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B20,B90,B92,C12,D2 |
Chr5:54074547 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B115,B40,C50 |
Chr5:54074612 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B60,B79,C78 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。