当前解析结果
SmilChr05G004190| 统一新 Gene ID | SmilChr05G004190 |
|---|---|
| 名称 | SmilChr05G004190 |
| 描述 | uncharacterized SmilChr05G004190 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 55795537 - 55798481 / + |
| NCBI Gene ID | LOC131025245 |
|---|---|
| GeneID | 131025245 |
| locus_tag | - |
| NCBI Name | LOC131025245 |
| 原始查询 | SmilChr05G004190 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | glycine-rich protein [Source:NCBI gene (formerly Entrezgene);Acc:839598]; symbol=AT1G27090; hit=AT1G27090; species=arabidopsis; confidence=high |
| 产物 | glycine-rich protein [Source:NCBI gene (formerly Entrezgene);Acc:839598]; symbol=AT1G27090; hit=AT1G27090; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G27090 (AT1G27090)glycine-rich protein [Source:NCBI gene (formerly Entrezgene);Acc:839598] identity=52.3; qcov=0.827; evalue=7.88e-111; confidence=high |
| Rice | Os03g0688200 (OSJNBa0022C08.20)- identity=40.8; qcov=0.811; evalue=3.65e-59; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131025245 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057810896.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057810896.1 |
| 3 | Cytoplasmic granule | 细胞质颗粒 | 0.40000 | XP_057810896.1 |
| 4 | Cytosol | 细胞质基质 | 0.40000 | XP_057810896.1 |
| 5 | Nucleoplasm | 核质 | 0.20000 | XP_057810896.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:55795838 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr5:55795948 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B111,B62,D7 |
Chr5:55795975 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B62,D7 |
Chr5:55796042 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B62,D7 |
Chr5:55796065 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B62,D11,D7 |
Chr5:55796074 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B110,B115,B93 |
Chr5:55796080 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D1 |
Chr5:55796090 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
Chr5:55796112 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B110,B115,B93 |
Chr5:55796124 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B110,B115,B93 |
Chr5:55796219 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B1,C58 |
Chr5:55796264 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B1,C58 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。