Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G004234`

染色体: Chr05 坐标: 56155700-56161265 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G004234`
名称	SmilChr05G004234
描述	potassium transporter 6-like
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	56155700 - 56161265 / `-`

ID 对照

NCBI Gene ID	`LOC131025280`
GeneID	`131025280`
locus_tag	`-`
NCBI Name	`LOC131025280`
原始查询	`SmilChr05G004234`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	potassium transporter 6-like
产物	potassium transporter 6-like
Arabidopsis	`AT1G70300` (KUP6) K+ uptake permease 6 [Source:NCBI gene (formerly Entrezgene);Acc:843366] identity=75.2; qcov=1.01; evalue=0; confidence=high
Rice	`Os06g0625900` (HAK10) - identity=64.9; qcov=1.07; evalue=0; confidence=high
GO	GO:0015079 (potassium ion transmembrane transporter activity); GO:0016020 (membrane); GO:0071805 (potassium ion transmembrane transport)
KEGG	-
Pfam	PF02705 (K_trans); PF22776 (K_trans_C)
InterPro	-
eggNOG	-
NR	GeneID:131025280

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057810966.1`
2	Vacuole	液泡	0.80000	`XP_057810966.1`
3	Vacuole membrane	液泡膜	0.80000	`XP_057810966.1`
4	Nucleus	细胞核	0.00000	`XP_057810966.1`
5	Chromosome	染色体	0.00000	`XP_057810966.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:56155963`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A18
`Chr5:56155972`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A3,B31,B35,B42,B43
`Chr5:56156005`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B22,B74,C82
`Chr5:56156007`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B72
`Chr5:56156019`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B3,B61,C51,C61
`Chr5:56156020`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B49
`Chr5:56156022`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A19,B61,B88
`Chr5:56156049`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B95
`Chr5:56156050`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A24,B20,B98,C14,C60
`Chr5:56156074`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A4
`Chr5:56156092`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A19,B61,B88,C25
`Chr5:56156095`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B140

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057810966.1

776 aa

388

776

K_trans

K_trans_C

PF02705 K_trans 22-499 aa PF22776 K_trans_C 530-776 aa

XP_057810967.1

776 aa

388

776

K_trans

K_trans_C

PF02705 K_trans 22-499 aa PF22776 K_trans_C 530-776 aa

XP_057810968.1

776 aa

388

776

K_trans

K_trans_C

PF02705 K_trans 22-499 aa PF22776 K_trans_C 530-776 aa

XP_057810969.1

776 aa

388

776

K_trans

K_trans_C

PF02705 K_trans 22-499 aa PF22776 K_trans_C 530-776 aa

XP_057810970.1

776 aa

388

776

K_trans

K_trans_C

PF02705 K_trans 22-499 aa PF22776 K_trans_C 530-776 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057810966.1`	Pfam	`PF02705`	K_trans	Domain	22	499	5.1e-164	546.8	K+ potassium transporter integral membrane domain
`XP_057810966.1`	Pfam	`PF22776`	K_trans_C	Domain	530	776	5.4e-28	98.4	K+ potassium transporter C-terminal domain
`XP_057810967.1`	Pfam	`PF02705`	K_trans	Domain	22	499	5.1e-164	546.8	K+ potassium transporter integral membrane domain
`XP_057810967.1`	Pfam	`PF22776`	K_trans_C	Domain	530	776	5.4e-28	98.4	K+ potassium transporter C-terminal domain
`XP_057810968.1`	Pfam	`PF02705`	K_trans	Domain	22	499	5.1e-164	546.8	K+ potassium transporter integral membrane domain
`XP_057810968.1`	Pfam	`PF22776`	K_trans_C	Domain	530	776	5.4e-28	98.4	K+ potassium transporter C-terminal domain
`XP_057810969.1`	Pfam	`PF02705`	K_trans	Domain	22	499	5.1e-164	546.8	K+ potassium transporter integral membrane domain
`XP_057810969.1`	Pfam	`PF22776`	K_trans_C	Domain	530	776	5.4e-28	98.4	K+ potassium transporter C-terminal domain
`XP_057810970.1`	Pfam	`PF02705`	K_trans	Domain	22	499	5.1e-164	546.8	K+ potassium transporter integral membrane domain
`XP_057810970.1`	Pfam	`PF22776`	K_trans_C	Domain	530	776	5.4e-28	98.4	K+ potassium transporter C-terminal domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XM_057954983.1
ACACACTCTATTTAAACTCACCCACCCATCAGCTGATCAAATCCCATCTTTCTAAAAATTTCACCAAAAACAAGCCTTGCTTCAGCAGACTTCTCATCCCTCTATATTCCTCTACAGAGATCTTCAACTGGTCATTGATGTTGGAGGCGCATGAAGAGTCGAATGGGCACGTCGAACTCATTTGAAAAAAAATAATTGGAGATGGTTTTCTTCAATCACTGAGAGAGCATTTCTGATGGATCTAGAAAGTGGGGTTTATC...

XM_057954985.1
ACACACTCTATTTAAACTCACCCACCCATCAGCTGATCAAATCCCATCTTTCTAAAAATTTCACCAAAAACAAGCCTTGCTTCAGCAGACTTCTCATCCCTCTATATTCCTCTACAGAGATCTTCAACTGGTCATTGATGTTGGAGGCGCATGAAGAGTCGAATGGGCACGTCGAACTCATTTGAAAAAAAATAATGTCTCTTTTGAAACCCTTTGTAGTATATATAACTCTTAAGTCTTAAACTATTTATAATTCATGT...

CDS

5 records

下载 CDS FASTA

LOC131025280
ATGGATCTAGAAAGTGGGGTTTATCAGAATCAAATAAAGAAAGAGTCTTGGAGAACGATTCTCACACTAGCTTACCAGAGCTTGGGAGTTGTGTATGGAGATTTGAGCACTTCACCGCTGTATGTGTACCAGAGCACTTTTGCTGAGGACATTGAGCATTCAGACACGAATGAGGAAATCTATGGAGTTTTGTCTCTTGTGTTTTGGACATTAACTCTTGTGCCTCTGCTGAAATATGTGTTCATTGTGTTAAGAGCTGA...

Protein

5 records

下载 Protein FASTA

XP_057810966.1
MDLESGVYQNQIKKESWRTILTLAYQSLGVVYGDLSTSPLYVYQSTFAEDIEHSDTNEEIYGVLSLVFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNPLPSFQQADEDLSAYKRDVVGPVPTSFGVRLKSTLERYRVLQRFLLVLALLGACMVIGDGILSPAISVFSAVSGVEVAMAKEHHKYVEVPVACIVLIALFALQHYGTHRVGFLFAPVVVTWLLCISSIGLYNIFYWNPHVYQALSPYYIYVF...

XP_057810967.1
MDLESGVYQNQIKKESWRTILTLAYQSLGVVYGDLSTSPLYVYQSTFAEDIEHSDTNEEIYGVLSLVFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNPLPSFQQADEDLSAYKRDVVGPVPTSFGVRLKSTLERYRVLQRFLLVLALLGACMVIGDGILSPAISVFSAVSGVEVAMAKEHHKYVEVPVACIVLIALFALQHYGTHRVGFLFAPVVVTWLLCISSIGLYNIFYWNPHVYQALSPYYIYVF...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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