当前解析结果
SmilChr05G004252| 统一新 Gene ID | SmilChr05G004252 |
|---|---|
| 名称 | SmilChr05G004252 |
| 描述 | uncharacterized SmilChr05G004252 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 56319435 - 56322856 / + |
| NCBI Gene ID | LOC131025300 |
|---|---|
| GeneID | 131025300 |
| locus_tag | - |
| NCBI Name | LOC131025300 |
| 原始查询 | SmilChr05G004252 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | RNA-binding (RRM/RBD/RNP motifs) family protein [Source:NCBI gene (formerly Entrezgene);Acc:817326]; symbol=AT2G27790; hit=AT2G27790; species=arabidopsis; confidence=high |
| 产物 | RNA-binding (RRM/RBD/RNP motifs) family protein [Source:NCBI gene (formerly Entrezgene);Acc:817326]; symbol=AT2G27790; hit=AT2G27790; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G27790 (AT2G27790)RNA-binding (RRM/RBD/RNP motifs) family protein [Source:NCBI gene (formerly Entrezgene);Acc:817326] identity=54.2; qcov=1.12; evalue=8.67e-87; confidence=high |
| Rice | Os02g0105000 (OJ1212_C06.20-1)- identity=59.2; qcov=1.04; evalue=6.42e-86; confidence=high |
| GO | GO:0003676 (nucleic acid binding); GO:0005654 (nucleoplasm) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131025300 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057810994.1 |
| 2 | Nucleoplasm | 核质 | 0.80000 | XP_057810994.1 |
| 3 | Nuclear speckle | 核斑点 | 0.60000 | XP_057810994.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057810994.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057810994.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:56320792 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B41 |
Chr5:56320793 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B18 |
Chr5:56320813 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A5,A6 |
Chr5:56321597 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B103,B105,B127,B80 |
Chr5:56321881 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B131,B86 |
Chr5:56321936 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B28 |
Chr5:56322091 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B84,C40,D9 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
5 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。