当前解析结果
SmilChr05G004274| 统一新 Gene ID | SmilChr05G004274 |
|---|---|
| 名称 | SmilChr05G004274 |
| 描述 | uncharacterized SmilChr05G004274 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 56547995 - 56551574 / + |
| NCBI Gene ID | LOC131025325 |
|---|---|
| GeneID | 131025325 |
| locus_tag | - |
| NCBI Name | LOC131025325 |
| 原始查询 | SmilChr05G004274 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | anthranilate phosphoribosyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:843394]; symbol=AT1G70570; hit=AT1G70570; species=arabidopsis; confidence=high |
| 产物 | anthranilate phosphoribosyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:843394]; symbol=AT1G70570; hit=AT1G70570; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G70570 (AT1G70570)anthranilate phosphoribosyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:843394] identity=72.4; qcov=0.969; evalue=0; confidence=high |
| Rice | Os02g0131200- identity=71.8; qcov=0.906; evalue=0; confidence=high |
| GO | GO:0003921 (GMP synthase activity); GO:0005829 (cytosol); GO:0006177 (GMP biosynthetic process) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131025325 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057811034.1 |
| 2 | Chloroplast stroma | 叶绿体基质 | 0.80000 | XP_057811034.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057811034.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057811034.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057811034.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:56548306 |
CG |
C |
1bp_deletion | frameshift_variant | 8 | B131,B20,B85,B97,C58,C62,C78,C8 |
Chr5:56548308 |
ATG |
A |
2bp_deletion | frameshift_variant | 8 | B131,B20,B85,B97,C58,C62,C78,C8 |
Chr5:56548326 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C83 |
Chr5:56548899 |
ATC |
A |
2bp_deletion | frameshift_variant | 4 | B123,B4,B56,B96 |
Chr5:56548899 |
ATC |
A |
2bp_deletion | CDS_variant | 4 | B123,B4,B56,B96 |
Chr5:56549070 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B95 |
Chr5:56549097 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C42,C81 |
Chr5:56549250 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr5:56549256 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B12,C58 |
Chr5:56549260 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B9 |
Chr5:56549477 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B84,C23 |
Chr5:56549479 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B21 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。