当前解析结果
SmilChr06G000059| 统一新 Gene ID | SmilChr06G000059 |
|---|---|
| 名称 | SmilChr06G000059 |
| 描述 | transcriptional regulator STERILE APETALA-like |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 486730 - 491477 / - |
| NCBI Gene ID | LOC130987607 |
|---|---|
| GeneID | 130987607 |
| locus_tag | - |
| NCBI Name | LOC130987607 |
| 原始查询 | SmilChr06G000059 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | transcriptional regulator STERILE APETALA-like |
| 产物 | transcriptional regulator STERILE APETALA-like |
| Arabidopsis | AT5G35770 (SAP)Transducin/WD40 repeat-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:833556] identity=55.1; qcov=0.993; evalue=3.84e-158; confidence=high |
| Rice | -- |
| GO | GO:0005515 (protein binding); GO:0030687 (preribosome, large subunit precursor) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130987607 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057767181.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057767181.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057767181.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057767181.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057767181.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:487222 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B69 |
Chr6:487317 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B127,B94 |
Chr6:487365 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B107,B122,B55,C32,C68 |
Chr6:487417 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B127,B94 |
Chr6:487426 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A8,B107,C51 |
Chr6:487456 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B107,B122,C2,C68 |
Chr6:487468 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A3 |
Chr6:487486 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B56 |
Chr6:487632 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C11,C69 |
Chr6:487669 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B10,B17 |
Chr6:487675 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr6:487992 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。