当前解析结果
SmilChr06G000081| 统一新 Gene ID | SmilChr06G000081 |
|---|---|
| 名称 | SmilChr06G000081 |
| 描述 | uncharacterized SmilChr06G000081 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 603449 - 606462 / - |
| NCBI Gene ID | LOC130987625 |
|---|---|
| GeneID | 130987625 |
| locus_tag | - |
| NCBI Name | LOC130987625 |
| 原始查询 | SmilChr06G000081 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:829186]; symbol=AT4G30630; hit=AT4G30630; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:829186]; symbol=AT4G30630; hit=AT4G30630; species=arabidopsis; confidence=low |
| Arabidopsis | AT4G30630 (AT4G30630)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:829186] identity=27.1; qcov=0.936; evalue=6.75e-15; confidence=low |
| Rice | Os08g0270800- identity=45.9; qcov=0.204; evalue=2.73e-07; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130987625 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057767206.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057767206.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057767206.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057767206.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057767206.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:603842 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B100,B4,C86 |
Chr6:603978 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B139 |
Chr6:604172 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B73,D11 |
Chr6:604225 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A16,B126,B65 |
Chr6:604232 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A4 |
Chr6:604301 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D2 |
Chr6:604330 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B67,C21 |
Chr6:604570 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | D2,D4 |
Chr6:605001 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B134,B14,C14,C34 |
Chr6:605725 |
T |
TG |
1bp_insertion | frameshift_variant | 2 | C11,C69 |
Chr6:605725 |
T |
TG |
1bp_insertion | CDS_variant | 2 | C11,C69 |
Chr6:605739 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B2,B33,C5 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。