Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G000129`

染色体: Chr06 坐标: 912905-920191 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G000129`
名称	SmilChr06G000129
描述	uncharacterized SmilChr06G000129
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	912905 - 920191 / `-`

ID 对照

NCBI Gene ID	`LOC130987675`
GeneID	`130987675`
locus_tag	`-`
NCBI Name	`LOC130987675`
原始查询	`SmilChr06G000129`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:835865]; symbol=AT5G57610; hit=AT5G57610; species=arabidopsis; confidence=high
产物	kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:835865]; symbol=AT5G57610; hit=AT5G57610; species=arabidopsis; confidence=high
Arabidopsis	`AT5G57610` (AT5G57610) kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:835865] identity=52.7; qcov=1.02; evalue=0; confidence=high
Rice	`Os06g0181200` - identity=71.5; qcov=0.248; evalue=1.63e-146; confidence=weak
GO	GO:0004672 (protein kinase activity); GO:0005515 (protein binding); GO:0005524 (ATP binding); GO:0005737 (cytoplasm); GO:0006468 (protein phosphorylation); GO:0007165 (signal transduction)
KEGG	-
Pfam	PF00069 (Pkinase); PF00564 (PB1); PF07714 (PK_Tyr_Ser-Thr)
InterPro	-
eggNOG	-
NR	GeneID:130987675

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	0.80000	`XP_057767266.1`
2	Cytoplasm	细胞质	0.60000	`XP_057767266.1`
3	Cytosol	细胞质基质	0.60000	`XP_057767266.1`
4	Nucleus	细胞核	0.00000	`XP_057767266.1`
5	Chromosome	染色体	0.00000	`XP_057767266.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:913657`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B102
`Chr6:913706`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A16,B91,C1,C35,C77
`Chr6:913768`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B34
`Chr6:913783`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr6:913798`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B25,B69,B73,C13
`Chr6:914634`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A16,B91,C1,C77,D10
`Chr6:916513`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B84
`Chr6:916784`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A3
`Chr6:916964`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A9,C12,C53
`Chr6:917012`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B25,B69,B73,C13
`Chr6:917313`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A1,B106,B15
`Chr6:917343`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A9,C12,C53

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057767266.1

1119 aa

560

1119

PB1

Pkinase

PK_Tyr_Ser-Thr

PF00564 PB1 35-119 aa PF00069 Pkinase 847-1107 aa PF07714 PK_Tyr_Ser-Thr 848-1109 aa

XP_057767267.1

1119 aa

560

1119

PB1

Pkinase

PK_Tyr_Ser-Thr

PF00564 PB1 35-119 aa PF00069 Pkinase 847-1107 aa PF07714 PK_Tyr_Ser-Thr 848-1109 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057767266.1`	Pfam	`PF00564`	PB1	Domain	35	119	7.9e-18	64.9	PB1 domain
`XP_057767266.1`	Pfam	`PF00069`	Pkinase	Domain	847	1107	9.3e-47	160.3	Protein kinase domain
`XP_057767266.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	848	1109	2.2e-62	211.4	Protein tyrosine and serine/threonine kinase
`XP_057767267.1`	Pfam	`PF00564`	PB1	Domain	35	119	7.9e-18	64.9	PB1 domain
`XP_057767267.1`	Pfam	`PF00069`	Pkinase	Domain	847	1107	9.3e-47	160.3	Protein kinase domain
`XP_057767267.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	848	1109	2.2e-62	211.4	Protein tyrosine and serine/threonine kinase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

6 records

下载 cDNA FASTA

XR_009089818.1
TATGCCGTTATTGCAGATAAATTGATGCCTATTTTTCCATAACTAAAAAGCCGCCACGTGTCCCGAGACCTGGCAACTCCACCTTCCCCAAACTCCAAACCTTTCCTCCCACCCTCGCCCTCTCTCCACAGCTCCGCCTCTCTCTCTCTCATCAATTTATCACCAAATCCCTCTAATTTCATCCCTTTTGGCCCCCTAGATATATTTCCATGAATTAGGGATTATATATCGCCCAACAGATACTTCCGCCTCTCAGTCCC...

XR_009089820.1
CATAACTAAAAAGCCGCCACGTGTCCCGAGACCTGGCAACTCCACCTTCCCCAAACTCCAAACCTTTCCTCCCACCCTCGCCCTCTCTCCACAGCTCCGCCTCTCTCTCTCTCATCAATTTATCACCAAATCCCTCTAATTTCATCCCTTTTGGCCCCCTAGATATATTTCCATGAATTAGGGATTATATATCGCCCAACAGATACTTCCGCCTCTCAGTCCCTTTTCTTATTTTTTTCCTCGCCGGTTTTTTTTCTTAT...

CDS

2 records

下载 CDS FASTA

LOC130987675
ATGGATAGCCCTACAATGATCCCGGCATGCGTCCTGAGTTCTGACGAAAGTCAGCGTGTTAAATTCTTATGTAGTTTCAGTGGTAGTATACTGCCTCGCCCCCAAGATGGGAAGCTTAGATATGTTGGAGGTGAGACACGGATTGTGAGTGTTCCGCGTGATATAACTTATGAAGAGCTCATGGGGAAGATGAGGGAGCTTTACGAGGGTGTAACTGTGCTGAAATACCAGCAGCCGGATGAAGATCTCGATGCTCTTGT...

Protein

2 records

下载 Protein FASTA

XP_057767266.1
MDSPTMIPACVLSSDESQRVKFLCSFSGSILPRPQDGKLRYVGGETRIVSVPRDITYEELMGKMRELYEGVTVLKYQQPDEDLDALVSVVNDDDVTNMMEEYDKLGSADGFTRLRIFLFAHPDQDGSLHFGDGDERDNERRYVDALNSLNDSPDSRKPLGESILVGSLDDVQAAEQYINQMNLDGSVHNQRNMELPMAQMNLRHLTIPHLGSGQLQQAVNQRYNEMEAPWSPAYYSPRQPVDQRPVAEFPTSPSSSRYRT...

XP_057767267.1
MDSPTMIPACVLSSDESQRVKFLCSFSGSILPRPQDGKLRYVGGETRIVSVPRDITYEELMGKMRELYEGVTVLKYQQPDEDLDALVSVVNDDDVTNMMEEYDKLGSADGFTRLRIFLFAHPDQDGSLHFGDGDERDNERRYVDALNSLNDSPDSRKPLGESILVGSLDDVQAAEQYINQMNLDGSVHNQRNMELPMAQMNLRHLTIPHLGSGQLQQAVNQRYNEMEAPWSPAYYSPRQPVDQRPVAEFPTSPSSSRYRT...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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