当前解析结果
SmilChr06G000142| 统一新 Gene ID | SmilChr06G000142 |
|---|---|
| 名称 | SmilChr06G000142 |
| 描述 | uncharacterized SmilChr06G000142 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 997437 - 1001380 / + |
| NCBI Gene ID | LOC130987687 |
|---|---|
| GeneID | 130987687 |
| locus_tag | - |
| NCBI Name | LOC130987687 |
| 原始查询 | SmilChr06G000142 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | SET domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:816400]; symbol=AT2G18850; hit=AT2G18850; species=arabidopsis; confidence=high |
| 产物 | SET domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:816400]; symbol=AT2G18850; hit=AT2G18850; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G18850 (AT2G18850)SET domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:816400] identity=56.1; qcov=0.969; evalue=0; confidence=high |
| Rice | Os08g0244400 (OsSET29)- identity=49.7; qcov=0.827; evalue=7.89e-142; confidence=high |
| GO | GO:0005634 (nucleus); GO:0016279 (protein-lysine N-methyltransferase activity); GO:0018026 (peptidyl-lysine monomethylation) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130987687 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.60000 | XP_057767279.1 |
| 2 | Cytoplasm | 细胞质 | 0.60000 | XP_057767279.1 |
| 3 | Cytosol | 细胞质基质 | 0.60000 | XP_057767279.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057767279.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057767279.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:997921 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B97 |
Chr6:998021 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B94,C15 |
Chr6:998071 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B104,B35,B60 |
Chr6:998102 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B137,B140 |
Chr6:998135 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B63,B81,C42 |
Chr6:998716 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A3,B23,B53,C81 |
Chr6:998725 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B91 |
Chr6:998755 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B26 |
Chr6:998813 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B119 |
Chr6:998828 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B26 |
Chr6:998878 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B91 |
Chr6:999188 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B104,B27,B99,C34 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。