当前解析结果
SmilChr06G000145| 统一新 Gene ID | SmilChr06G000145 |
|---|---|
| 名称 | SmilChr06G000145 |
| 描述 | uncharacterized SmilChr06G000145 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 1012751 - 1013356 / - |
| NCBI Gene ID | LOC130990030 |
|---|---|
| GeneID | 130990030 |
| locus_tag | - |
| NCBI Name | LOC130990030 |
| 原始查询 | SmilChr06G000145 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:829146]; symbol=AT4G30230; hit=AT4G30230; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:829146]; symbol=AT4G30230; hit=AT4G30230; species=arabidopsis; confidence=low |
| Arabidopsis | AT4G30230 (AT4G30230)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:829146] identity=33.5; qcov=1.1; evalue=5.72e-18; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990030 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057770215.1 |
| 2 | Nucleus | 细胞核 | 0.20000 | XP_057770215.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057770215.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057770215.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057770215.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:1012833 |
ACC |
A |
2bp_deletion | frameshift_variant | 1 | C78 |
Chr6:1012833 |
ACC |
A |
2bp_deletion | CDS_variant | 1 | C78 |
Chr6:1012856 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr6:1012869 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C56,C65 |
Chr6:1013015 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B115,B120,B124,B20 |
Chr6:1013051 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B104,B84 |
Chr6:1013126 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr6:1013335 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D3 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。