Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G000155`

染色体: Chr06 坐标: 1080432-1081346 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G000155`
名称	SmilChr06G000155
描述	homeobox-leucine zipper protein HAT14-like
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	1080432 - 1081346 / `-`

ID 对照

NCBI Gene ID	`LOC130987700`
GeneID	`130987700`
locus_tag	`-`
NCBI Name	`LOC130987700`
原始查询	`SmilChr06G000155`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	homeobox-leucine zipper protein HAT14-like
产物	homeobox-leucine zipper protein HAT14-like
Arabidopsis	`AT5G06710` (HAT14) homeobox leucine zipper protein [Source:NCBI gene (formerly Entrezgene);Acc:830560] identity=64.3; qcov=0.651; evalue=1.42e-36; confidence=medium
Rice	`Os04g0548700` (Oshox17) - identity=62; qcov=0.628; evalue=8.92e-36; confidence=medium
GO	GO:0000981 (DNA-binding transcription factor activity, RNA polymerase II-specific); GO:0006355 (regulation of DNA-templated transcription); GO:0043565 (sequence-specific DNA binding)
KEGG	-
Pfam	PF00046 (Homeodomain); PF02183 (HALZ)
InterPro	-
eggNOG	-
NR	GeneID:130987700

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057767304.1`
2	Chromosome	染色体	0.00000	`XP_057767304.1`
3	Centromere	着丝粒	0.00000	`XP_057767304.1`
4	Chromatin	染色质	0.00000	`XP_057767304.1`
5	Telomere	端粒	0.00000	`XP_057767304.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:1080714`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C38,C39
`Chr6:1080715`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C74
`Chr6:1080718`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B101,C37,D6
`Chr6:1080730`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	A18,B2
`Chr6:1080864`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B113,C79
`Chr6:1081112`	`TAG`	`T`	2bp_deletion	frameshift_variant	2	B138,B64
`Chr6:1081112`	`TAG`	`T`	2bp_deletion	CDS_variant	2	B138,B64
`Chr6:1081200`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B105
`Chr6:1081227`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B22
`Chr6:1081233`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B22
`Chr6:1081244`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B137
`Chr6:1081245`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B112

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057767304.1

174 aa

174

Homeodomain

HALZ

PF00046 Homeodomain 57-111 aa PF02183 HALZ 113-147 aa

XP_057767305.1

172 aa

172

Homeodomain

HALZ

PF00046 Homeodomain 57-109 aa PF02183 HALZ 111-145 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057767304.1`	Pfam	`PF00046`	Homeodomain	Domain	57	111	3.7e-16	59.4	Homeodomain
`XP_057767304.1`	Pfam	`PF02183`	HALZ	Coiled-coil	113	147	3.2e-08	34.3	Homeobox associated leucine zipper
`XP_057767305.1`	Pfam	`PF00046`	Homeodomain	Domain	57	109	8.9e-14	51.8	Homeodomain
`XP_057767305.1`	Pfam	`PF02183`	HALZ	Coiled-coil	111	145	3.3e-08	34.3	Homeobox associated leucine zipper

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057911322.1
ATGGAGGAATATGATTGCAACACTACTCTAATGCTCGGCTTCAATGATCATCAAAACGGCCCCAAAAGACACGTTCGCGCTTTTCTCGACCAAGATATTATCGAGTCGAGCTCGAGCCTGAAAAGTCGAGAACACGAGGAGGAAATCGATTTTTTCAAAGATTTTGGTAGAAAGAAACTGAGGCTCACTAAAGATCAGACCACCTTGCTCGAAGACAGCTTCAAACAACACTCTACCCTTAATACGAAGCAAGCATTAGC...

XM_057911321.1
ATGGAGGAATATGATTGCAACACTACTCTAATGCTCGGCTTCAATGATCATCAAAACGGCCCCAAAAGACACGTTCGCGCTTTTCTCGACCAAGATATTATCGAGTCGAGCTCGAGCCTGAAAAGTCGAGAACACGAGGAGGAAATCGATTTTTTCAAAGATTTTGGTAGAAAGAAACTGAGGCTCACTAAAGATCAGACCACCTTGCTCGAAGACAGCTTCAAACAACACTCTACCCTTAATACGGTACAGAAGCAAGC...

CDS

2 records

下载 CDS FASTA

LOC130987700
ATGGAGGAATATGATTGCAACACTACTCTAATGCTCGGCTTCAATGATCATCAAAACGGCCCCAAAAGACACGTTCGCGCTTTTCTCGACCAAGATATTATCGAGTCGAGCTCGAGCCTGAAAAGTCGAGAACACGAGGAGGAAATCGATTTTTTCAAAGATTTTGGTAGAAAGAAACTGAGGCTCACTAAAGATCAGACCACCTTGCTCGAAGACAGCTTCAAACAACACTCTACCCTTAATACGAAGCAAGCATTAGC...

Protein

2 records

下载 Protein FASTA

XP_057767304.1
MEEYDCNTTLMLGFNDHQNGPKRHVRAFLDQDIIESSSSLKSREHEEEIDFFKDFGRKKLRLTKDQTTLLEDSFKQHSTLNTVQKQALAGKLCLKPRQVEVWFQNRRARSKLKQTEVEWQLLKRNCERLSEENRRLKKEVVELRSEMKICKPLEPPQQRRHSFHVHEAVKLQKD

XP_057767305.1
MEEYDCNTTLMLGFNDHQNGPKRHVRAFLDQDIIESSSSLKSREHEEEIDFFKDFGRKKLRLTKDQTTLLEDSFKQHSTLNTKQALAGKLCLKPRQVEVWFQNRRARSKLKQTEVEWQLLKRNCERLSEENRRLKKEVVELRSEMKICKPLEPPQQRRHSFHVHEAVKLQKD

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

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