Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G000191`

染色体: Chr06 坐标: 1319084-1323156 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G000191`
名称	SmilChr06G000191
描述	protein DETOXIFICATION 21-like
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	1319084 - 1323156 / `-`

ID 对照

NCBI Gene ID	`LOC130987737`
GeneID	`130987737`
locus_tag	`-`
NCBI Name	`LOC130987737`
原始查询	`SmilChr06G000191`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	protein DETOXIFICATION 21-like
产物	protein DETOXIFICATION 21-like
Arabidopsis	`AT1G33110` (AT1G33110) MATE efflux family protein [Source:NCBI gene (formerly Entrezgene);Acc:840207] identity=53.2; qcov=0.979; evalue=2.33e-179; confidence=high
Rice	`Os12g0126000` - identity=52.9; qcov=0.992; evalue=2.06e-175; confidence=high
GO	GO:0015297 (antiporter activity); GO:0016020 (membrane); GO:0042910 (xenobiotic transmembrane transporter activity); GO:1990961 (xenobiotic detoxification by transmembrane export across the plasma membrane)
KEGG	-
Pfam	PF01554 (MatE)
InterPro	-
eggNOG	-
NR	GeneID:130987737

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Vacuole membrane	液泡膜	0.80000	`XP_057767368.1`
2	Cell membrane	细胞膜	0.60000	`XP_057767368.1`
3	Vacuole	液泡	0.60000	`XP_057767368.1`
4	Nucleus	细胞核	0.00000	`XP_057767368.1`
5	Chromosome	染色体	0.00000	`XP_057767368.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:1319292`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C36
`Chr6:1319501`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B131,B23,B53,B66
`Chr6:1319689`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B72
`Chr6:1319977`	`CA`	`C`	1bp_deletion	frameshift_variant	4	A18,B52,B61,C72
`Chr6:1319977`	`CA`	`C`	1bp_deletion	CDS_variant	4	A18,B52,B61,C72
`Chr6:1320576`	`G`	`GA`	1bp_insertion	frameshift_variant	52	A18,A22,A24,A4,A5,A8,B10,B103,B104,B105,B109,B111,B114,B123,B126,B14,B15,B17,B20,B29,B30,B33,B37,B46,B47,B52,B60,B7,B85,C11,C14,C20,C24,C28,C29,C37,C42,C47,C51,C53,C61,C69,C72,C76,C78,C79,C82,C85,C86,C9,D10,D11
`Chr6:1320578`	`G`	`GA`	1bp_insertion	frameshift_variant	55	A18,A22,A24,A4,A5,A8,B10,B103,B104,B105,B109,B111,B114,B123,B126,B14,B15,B17,B20,B29,B30,B33,B37,B46,B47,B52,B60,B7,B78,B85,C1,C11,C14,C20,C24,C28,C29,C37,C42,C47,C49,C51,C53,C61,C69,C72,C76,C78,C79,C82,C85,C86,C9,D10,D11
`Chr6:1320582`	`ATG`	`A`	2bp_deletion	frameshift_variant	55	A18,A22,A24,A4,A5,A8,B10,B103,B104,B105,B109,B111,B114,B123,B126,B14,B15,B17,B20,B29,B30,B33,B37,B46,B47,B52,B60,B7,B78,B85,C1,C11,C14,C20,C24,C28,C29,C37,C42,C47,C49,C51,C53,C61,C69,C72,C76,C78,C79,C82,C85,C86,C9,D10,D11
`Chr6:1320623`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B8,C21,C29
`Chr6:1320691`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A9,B138,B89
`Chr6:1320764`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B17,B29,C78,C80
`Chr6:1320962`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057767368.1

482 aa

241

482

MatE

PF01554 MatE 36-196 aa PF01554 MatE 259-418 aa

XP_057767369.1

482 aa

241

482

MatE

PF01554 MatE 36-196 aa PF01554 MatE 259-418 aa

XP_057767370.1

482 aa

241

482

MatE

PF01554 MatE 36-196 aa PF01554 MatE 259-418 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057767368.1`	Pfam	`PF01554`	MatE	Family	36	196	5.6e-51	173.1	MatE
`XP_057767368.1`	Pfam	`PF01554`	MatE	Family	259	418	5.6e-51	173.1	MatE
`XP_057767369.1`	Pfam	`PF01554`	MatE	Family	36	196	5.6e-51	173.1	MatE
`XP_057767369.1`	Pfam	`PF01554`	MatE	Family	259	418	5.6e-51	173.1	MatE
`XP_057767370.1`	Pfam	`PF01554`	MatE	Family	36	196	5.6e-51	173.1	MatE
`XP_057767370.1`	Pfam	`PF01554`	MatE	Family	259	418	5.6e-51	173.1	MatE

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057911387.1
ACCAAATCCAATAATTATTTGCAGCGTGTCATGGCCGCCATATATGATGATCACATGTTTTTTTTCAGTTCTCAAGAAAATACATTATTAAAGTAAAGTTGGAAGCTGACATTTGATTGTAACAAGGCGTCAGCAATGAATGGGCAAAACATGCATTATTTTTTTCCCTAAAAAAAACAAAACAAATTAAAATCATACACTGAGATTCCATATGCATCACGTTTAATTATATAATAATTGGGATTCTAACTCTTCATTTT...

XM_057911386.1
GGGAGGAGCAGGAGGTAAGAACCCTTTGAAACCATTTCAATTTTACAAGTTTCTTGAATTTCAGTAACATTAATTGTGCTCTCTCAAAGCTTCAGCCTTTATGCTAATTGTGTGTATGATATTGTTACAACACTCAAAATTTGTTATTAGTTAGTCTTTGAGCAATGAAAATTTTGGGGAAGTTATTGGAATTTGTTGAATAGTTTGTATAATTACACATTGATTTGAAGCAGAGAGAATCCATTATGTAAAAAAACTTA...

CDS

3 records

下载 CDS FASTA

LOC130987737
ATGGAAGGCGAGATCCACGAGAAGCTGCTTTTAGAAGCTAAAAACAAGGAGACTCTGATGAAGAAGATATGGGAAGAGAACAAGCAAATGTGGATTGTTTCTGGCCCGGCCATCTTGATCCGATGCTCGACATTTGGTGTTCATGTCGTCAGCCAAGCGTTTATAGGCCAGTTCAGCTCCTCAGTGCTCGCTGCCTATGCCCTCGTCTTCACTGTCCTCTTCAGATTCTACCTTGGCATATTGATGGGCATAAATGGCGG...

Protein

3 records

下载 Protein FASTA

XP_057767368.1
MEGEIHEKLLLEAKNKETLMKKIWEENKQMWIVSGPAILIRCSTFGVHVVSQAFIGQFSSSVLAAYALVFTVLFRFYLGILMGINGGLGTLCGQAYGAKQYHKLGIYLQQQWLILFVITALLSPLFVFAAPILKALGQDEHIAEGAGSLALWFIPMIFLYAVCFSCNTYLQAQSKNFILSCFAVLSFLQHIFVSWLLAIRFEFGVGGVMVSTVLAYLVPNVGQLAYIMCGGCRETWRGFTTACFKDLGLTVKLSISSGVM...

XP_057767369.1
MEGEIHEKLLLEAKNKETLMKKIWEENKQMWIVSGPAILIRCSTFGVHVVSQAFIGQFSSSVLAAYALVFTVLFRFYLGILMGINGGLGTLCGQAYGAKQYHKLGIYLQQQWLILFVITALLSPLFVFAAPILKALGQDEHIAEGAGSLALWFIPMIFLYAVCFSCNTYLQAQSKNFILSCFAVLSFLQHIFVSWLLAIRFEFGVGGVMVSTVLAYLVPNVGQLAYIMCGGCRETWRGFTTACFKDLGLTVKLSISSGVM...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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