当前解析结果
SmilChr06G000432| 统一新 Gene ID | SmilChr06G000432 |
|---|---|
| 名称 | SmilChr06G000432 |
| 描述 | uncharacterized SmilChr06G000432 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 3551757 - 3553845 / - |
| NCBI Gene ID | LOC130987984 |
|---|---|
| GeneID | 130987984 |
| locus_tag | - |
| NCBI Name | LOC130987984 |
| 原始查询 | SmilChr06G000432 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:836308]; symbol=AT5G61865; hit=AT5G61865; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:836308]; symbol=AT5G61865; hit=AT5G61865; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G61865 (AT5G61865)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:836308] identity=35.2; qcov=0.992; evalue=1.22e-63; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130987984 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057767700.1 |
| 2 | Chromosome | 染色体 | 0.80000 | XP_057767700.1 |
| 3 | Cytoskeleton | 细胞骨架 | 0.20000 | XP_057767700.1 |
| 4 | Spindle | Spindle | 0.20000 | XP_057767700.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057767700.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:3552137 |
AC |
A |
1bp_deletion | frameshift_variant | 1 | C79 |
Chr6:3552137 |
AC |
A |
1bp_deletion | CDS_variant | 1 | C79 |
Chr6:3552161 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B97,C38 |
Chr6:3552206 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C75 |
Chr6:3552256 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr6:3552534 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C13 |
Chr6:3552558 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B52,B86,C17,C63 |
Chr6:3552599 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B37,C61 |
Chr6:3552657 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B131,C75,C83 |
Chr6:3552715 |
A |
AT |
1bp_insertion | frameshift_variant | 32 | A10,A18,A2,A24,B102,B105,B11,B112,B118,B125,B131,B132,B135,B138,B25,B28,B31,B36,B40,B47,B55,B88,B95,C33,C59,C64,C75,C83,D1,D3,D4,D8 |
Chr6:3552762 |
AGC |
A |
2bp_deletion | frameshift_variant | 5 | B105,B11,B118,B88,B95 |
Chr6:3552762 |
AGC |
A |
2bp_deletion | CDS_variant | 5 | B105,B11,B118,B88,B95 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。