当前解析结果
SmilChr06G000449| 统一新 Gene ID | SmilChr06G000449 |
|---|---|
| 名称 | SmilChr06G000449 |
| 描述 | uncharacterized SmilChr06G000449 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 3635625 - 3637633 / + |
| NCBI Gene ID | LOC130987999 |
|---|---|
| GeneID | 130987999 |
| locus_tag | - |
| NCBI Name | LOC130987999 |
| 原始查询 | SmilChr06G000449 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | NFU1 iron-sulfur cluster protein [Source:NCBI gene (formerly Entrezgene);Acc:830624]; symbol=AT5G07330; hit=AT5G07330; species=arabidopsis; confidence=medium |
| 产物 | NFU1 iron-sulfur cluster protein [Source:NCBI gene (formerly Entrezgene);Acc:830624]; symbol=AT5G07330; hit=AT5G07330; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G07330 (AT5G07330)NFU1 iron-sulfur cluster protein [Source:NCBI gene (formerly Entrezgene);Acc:830624] identity=38.9; qcov=1.12; evalue=1.37e-34; confidence=medium |
| Rice | Os11g0533400- identity=44.1; qcov=1; evalue=2.14e-26; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130987999 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057767718.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 1.00000 | XP_057767718.1 |
| 3 | Mitochondrion inner membrane | 线粒体内膜 | 1.00000 | XP_057767718.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057767718.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057767718.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:3637101 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B40,B44 |
Chr6:3637120 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B52 |
Chr6:3637184 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C50 |
Chr6:3637240 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B129,C15,C74 |
Chr6:3637247 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A21 |
Chr6:3637264 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C58 |
Chr6:3637297 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C58 |
Chr6:3637355 |
A |
AT |
1bp_insertion | frameshift_variant | 5 | B17,B63,B99,C32,C68 |
Chr6:3637355 |
A |
AT |
1bp_insertion | CDS_variant | 5 | B17,B63,B99,C32,C68 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。