当前解析结果
SmilChr06G000731| 统一新 Gene ID | SmilChr06G000731 |
|---|---|
| 名称 | SmilChr06G000731 |
| 描述 | uncharacterized SmilChr06G000731 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 6725476 - 6729825 / - |
| NCBI Gene ID | LOC130988282 |
|---|---|
| GeneID | 130988282 |
| locus_tag | - |
| NCBI Name | LOC130988282 |
| 原始查询 | SmilChr06G000731 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | nucleoporin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:832143]; symbol=AT5G20200; hit=AT5G20200; species=arabidopsis; confidence=low |
| 产物 | nucleoporin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:832143]; symbol=AT5G20200; hit=AT5G20200; species=arabidopsis; confidence=low |
| Arabidopsis | AT5G20200 (AT5G20200)nucleoporin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:832143] identity=29.1; qcov=1.09; evalue=3.44e-44; confidence=low |
| Rice | Os06g0606900- identity=29.3; qcov=0.369; evalue=4.28e-14; confidence=low |
| GO | GO:0005635 (nuclear envelope); GO:0071763 (nuclear membrane organization) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130988282 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057768069.1 |
| 2 | Nucleus membrane | 核膜 | 0.80000 | XP_057768069.1 |
| 3 | Chromosome | 染色体 | 0.40000 | XP_057768069.1 |
| 4 | Nuclear pore complex | 核孔复合体 | 0.40000 | XP_057768069.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057768069.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:6725900 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A20,B44,B51,C27 |
Chr6:6726028 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C64,C66,D1 |
Chr6:6726158 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A2,B124,B2,C8 |
Chr6:6726562 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B104,B72 |
Chr6:6726589 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C8 |
Chr6:6726657 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C64,C66 |
Chr6:6726778 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr6:6726792 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B104,B72 |
Chr6:6726852 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B140,C85 |
Chr6:6726877 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B104,B72 |
Chr6:6726911 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B74,C2,C32,C68 |
Chr6:6726966 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B104,B72 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。