当前解析结果
SmilChr06G000860| 统一新 Gene ID | SmilChr06G000860 |
|---|---|
| 名称 | SmilChr06G000860 |
| 描述 | alpha/beta hydrolase domain-containing protein WAV2 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 8127758 - 8135321 / + |
| NCBI Gene ID | LOC130988393 |
|---|---|
| GeneID | 130988393 |
| locus_tag | - |
| NCBI Name | LOC130988393 |
| 原始查询 | SmilChr06G000860 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | alpha/beta hydrolase domain-containing protein WAV2 |
| 产物 | alpha/beta hydrolase domain-containing protein WAV2 |
| Arabidopsis | AT5G20520 (WAV2)alpha/beta-Hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:832174] identity=79.9; qcov=0.994; evalue=0; confidence=high |
| Rice | Os07g0608300 (OsPOP16)- identity=71.7; qcov=0.99; evalue=3.91e-174; confidence=high |
| GO | GO:0006508 (proteolysis); GO:0008236 (serine-type peptidase activity); GO:0008474 (palmitoyl-(protein) hydrolase activity); GO:0016020 (membrane) |
| KEGG | - |
| Pfam | PF00326 (Peptidase_S9); PF00561 (Abhydrolase_1); PF12146 (Hydrolase_4) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130988393 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057768200.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 1.00000 | XP_057768200.1 |
| 3 | Lipid droplet | 脂滴 | 0.20000 | XP_057768200.1 |
| 4 | Mitochondrion | 线粒体 | 0.20000 | XP_057768201.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057768200.1 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057768200.1PF12146
Hydrolase_4 104-201 aa
PF00561
Abhydrolase_1 104-202 aa
PF00326
Peptidase_S9 132-296 aa
XP_057768201.1PF12146
Hydrolase_4 104-201 aa
PF00561
Abhydrolase_1 104-202 aa
PF00326
Peptidase_S9 132-296 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057768200.1 |
Pfam | PF12146 |
Hydrolase_4 | Domain | 104 | 201 | 3.4e-14 | 53.5 | Serine aminopeptidase, S33 |
XP_057768200.1 |
Pfam | PF00561 |
Abhydrolase_1 | Domain | 104 | 202 | 2.8e-13 | 50.8 | alpha/beta hydrolase fold |
XP_057768200.1 |
Pfam | PF00326 |
Peptidase_S9 | Domain | 132 | 296 | 1.2e-14 | 55.1 | Prolyl oligopeptidase family |
XP_057768201.1 |
Pfam | PF12146 |
Hydrolase_4 | Domain | 104 | 201 | 3.1e-14 | 53.6 | Serine aminopeptidase, S33 |
XP_057768201.1 |
Pfam | PF00561 |
Abhydrolase_1 | Domain | 104 | 202 | 2.5e-13 | 51.0 | alpha/beta hydrolase fold |
XP_057768201.1 |
Pfam | PF00326 |
Peptidase_S9 | Domain | 132 | 296 | 1.1e-14 | 55.2 | Prolyl oligopeptidase family |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。