Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G000916`

染色体: Chr06 坐标: 8678388-8685951 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G000916`
名称	SmilChr06G000916
描述	potassium channel AKT1
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	8678388 - 8685951 / `-`

ID 对照

NCBI Gene ID	`LOC130988448`
GeneID	`130988448`
locus_tag	`-`
NCBI Name	`LOC130988448`
原始查询	`SmilChr06G000916`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	potassium channel AKT1
产物	potassium channel AKT1
Arabidopsis	`AT2G26650` (KT1) K+ transporter 1 [Source:NCBI gene (formerly Entrezgene);Acc:817206] identity=70.4; qcov=0.994; evalue=0; confidence=high
Rice	`Os01g0648000` (OsAKT1) - identity=62.9; qcov=1.02; evalue=0; confidence=high
GO	GO:0005249 (voltage-gated potassium channel activity); GO:0005515 (protein binding); GO:0006813 (potassium ion transport); GO:0016020 (membrane); GO:0055085 (transmembrane transport)
KEGG	-
Pfam	PF00023 (Ank); PF00027 (cNMP_binding); PF00520 (Ion_trans); PF07885 (Ion_trans_2); PF11834 (KHA); PF12796 (Ank_2); PF13606 (Ank_3); PF13637 (Ank_4); PF13857 (Ank_5)
InterPro	-
eggNOG	-
NR	GeneID:130988448

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057768268.1`
2	Cell projection	细胞突起	0.20000	`XP_057768269.1`
3	Nucleus	细胞核	0.00000	`XP_057768268.1`
4	Chromosome	染色体	0.00000	`XP_057768268.1`
5	Centromere	着丝粒	0.00000	`XP_057768268.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:8678786`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B26
`Chr6:8679029`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C20
`Chr6:8679070`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B23,D3
`Chr6:8679234`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B85,B94,C85
`Chr6:8680944`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A3,B54,C7,C81
`Chr6:8681094`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr6:8681522`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B23,D3
`Chr6:8684037`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A15,B107,C38
`Chr6:8684103`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A3,B54,C7,C81
`Chr6:8684147`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B131,C25,C57
`Chr6:8684765`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C87,D2

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057768268.1

893 aa

446

893

Ion_trans

Ion_trans_2

cNMP_binding

Ank_4

Ank_2

Ank_5

Ank_3

Ank

Ank_4

Ank_2

Ank_5

Ank_3

Ank

KHA

PF00520 Ion_trans 73-318 aa PF07885 Ion_trans_2 221-311 aa PF00027 cNMP_binding 411-496 aa PF13637 Ank_4 541-590 aa PF12796 Ank_2 541-631 aa PF13857 Ank_5 556-607 aa PF13606 Ank_3 569-597 aa PF00023 Ank 569-600 aa PF13637 Ank_4 642-687 aa PF12796 Ank_2 642-719 aa PF13857 Ank_5 665-707 aa PF13606 Ank_3 666-694 aa PF00023 Ank 666-695 aa PF11834 KHA 821-883 aa

XP_057768269.1

713 aa

356

713

Ion_trans

Ion_trans_2

cNMP_binding

Ank_4

Ank_2

Ank_5

Ank_3

Ank

Ank_4

Ank_2

Ank_5

Ank_3

Ank

KHA

PF00520 Ion_trans 1-138 aa PF07885 Ion_trans_2 41-131 aa PF00027 cNMP_binding 231-316 aa PF13637 Ank_4 361-410 aa PF12796 Ank_2 361-451 aa PF13857 Ank_5 376-427 aa PF13606 Ank_3 389-417 aa PF00023 Ank 389-420 aa PF13637 Ank_4 462-507 aa PF12796 Ank_2 462-539 aa PF13857 Ank_5 485-527 aa PF13606 Ank_3 486-514 aa PF00023 Ank 486-515 aa PF11834 KHA 641-703 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057768268.1`	Pfam	`PF00520`	Ion_trans	Family	73	318	7.8e-44	150.4	Ion transport protein
`XP_057768268.1`	Pfam	`PF07885`	Ion_trans_2	Family	221	311	5.8e-13	49.2	Ion channel
`XP_057768268.1`	Pfam	`PF00027`	cNMP_binding	Domain	411	496	1.5e-15	57.6	Cyclic nucleotide-binding domain
`XP_057768268.1`	Pfam	`PF13637`	Ank_4	Repeat	541	590	3.1e-21	75.7	Ankyrin repeats (many copies)
`XP_057768268.1`	Pfam	`PF12796`	Ank_2	Repeat	541	631	4.8e-31	107.9	Ankyrin repeats (3 copies)
`XP_057768268.1`	Pfam	`PF13857`	Ank_5	Repeat	556	607	4.7e-18	65.8	Ankyrin repeats (many copies)
`XP_057768268.1`	Pfam	`PF13606`	Ank_3	Repeat	569	597	2e-15	55.9	Ankyrin repeat
`XP_057768268.1`	Pfam	`PF00023`	Ank	Repeat	569	600	1.1e-25	89.0	Ankyrin repeat
`XP_057768268.1`	Pfam	`PF13637`	Ank_4	Repeat	642	687	3.1e-21	75.7	Ankyrin repeats (many copies)
`XP_057768268.1`	Pfam	`PF12796`	Ank_2	Repeat	642	719	4.8e-31	107.9	Ankyrin repeats (3 copies)
`XP_057768268.1`	Pfam	`PF13857`	Ank_5	Repeat	665	707	4.7e-18	65.8	Ankyrin repeats (many copies)
`XP_057768268.1`	Pfam	`PF13606`	Ank_3	Repeat	666	694	2e-15	55.9	Ankyrin repeat
`XP_057768268.1`	Pfam	`PF00023`	Ank	Repeat	666	695	1.1e-25	89.0	Ankyrin repeat
`XP_057768268.1`	Pfam	`PF11834`	KHA	Family	821	883	1e-22	80.6	KHA, dimerisation domain of potassium ion channel
`XP_057768269.1`	Pfam	`PF00520`	Ion_trans	Family	1	138	1.4e-27	97.1	Ion transport protein
`XP_057768269.1`	Pfam	`PF07885`	Ion_trans_2	Family	41	131	5.3e-13	49.4	Ion channel
`XP_057768269.1`	Pfam	`PF00027`	cNMP_binding	Domain	231	316	1e-15	58.1	Cyclic nucleotide-binding domain
`XP_057768269.1`	Pfam	`PF13637`	Ank_4	Repeat	361	410	1.1e-21	77.1	Ankyrin repeats (many copies)
`XP_057768269.1`	Pfam	`PF12796`	Ank_2	Repeat	361	451	2.5e-31	108.8	Ankyrin repeats (3 copies)
`XP_057768269.1`	Pfam	`PF13857`	Ank_5	Repeat	376	427	2.4e-18	66.7	Ankyrin repeats (many copies)
`XP_057768269.1`	Pfam	`PF13606`	Ank_3	Repeat	389	417	5.4e-16	57.6	Ankyrin repeat
`XP_057768269.1`	Pfam	`PF00023`	Ank	Repeat	389	420	5.8e-26	89.8	Ankyrin repeat
`XP_057768269.1`	Pfam	`PF13637`	Ank_4	Repeat	462	507	1.1e-21	77.1	Ankyrin repeats (many copies)
`XP_057768269.1`	Pfam	`PF12796`	Ank_2	Repeat	462	539	2.5e-31	108.8	Ankyrin repeats (3 copies)
`XP_057768269.1`	Pfam	`PF13857`	Ank_5	Repeat	485	527	2.4e-18	66.7	Ankyrin repeats (many copies)
`XP_057768269.1`	Pfam	`PF13606`	Ank_3	Repeat	486	514	5.4e-16	57.6	Ankyrin repeat
`XP_057768269.1`	Pfam	`PF00023`	Ank	Repeat	486	515	5.8e-26	89.8	Ankyrin repeat
`XP_057768269.1`	Pfam	`PF11834`	KHA	Family	641	703	7.2e-23	81.1	KHA, dimerisation domain of potassium ion channel

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057912285.1
AGCCAATATTCAACGAGCGCACAGCACAGGCACAGAGGCACGTCATCCAACCCCAAAAAAATTAAATAAAAACCTTCCAAATTTGCTTGCAGACATACAATGGCGGATGCATATGGCAACACTAGAGGCGGTGGCCTGCTGAGGGTTTCAATGTGCGGCGGCGCCGACGCCGACGCTCAAGCACGTGAGATTGAACAGCTCTCGCGCGAAGGCAGCCAATACAGCCTCTCCACTGGGATTCTTCCCTCACTTGGCGCCAG...

XM_057912286.1
TGAGATTGAACAGCTCTCGCGCGAAGGCAGCCAATACAGCCTCTCCACTGGGATTCTTCCCTCACTTGGCGCCAGAAGTAATCGCAGAGTTAGGCTTCGTCCTTACATCGTCTCACCTTACGATCGCCGCTACAGGTTGAATTGAATTTTGCAGAGCATGGCAAAACTTTCTTGTTGTGTTGGTTGTTTATACTGCTTGGGTGTCTCCATTCGAATTCGGGTTTCTTGATACGCCGGCAAAGCCTCTCTCCGTCACGGAC...

CDS

2 records

下载 CDS FASTA

LOC130988448
ATGGCGGATGCATATGGCAACACTAGAGGCGGTGGCCTGCTGAGGGTTTCAATGTGCGGCGGCGCCGACGCCGACGCTCAAGCACGTGAGATTGAACAGCTCTCGCGCGAAGGCAGCCAATACAGCCTCTCCACTGGGATTCTTCCCTCACTTGGCGCCAGAAGTAATCGCAGAGTTAGGCTTCGTCCTTACATCGTCTCACCTTACGATCGCCGCTACAGAGCATGGCAAAACTTTCTTGTTGTGTTGGTTGTTTATAC...

LOC130988448
ATGCTTCGTCTCTGGCGTCTTAGAAGAGTTGGCGCCTTATTTGCACGATTGGAGAAAGATAAGAACTTCAACTACTTTTGGGTTAGGTGTGCCAAGCTCGTCTGTGTAACTCTGTTTGCAGTTCATTGTGCTGGTTGCTTCTATTATCTACTTGCTGCCCATTACCCTAATCCAGATAAGACTTGGATTGGAGCAGCCATAGAGAATTTCCATGATACAAGCATATGGCTGCGCTACGTGACTTCAATTTATTGGTCCAT...

Protein

2 records

下载 Protein FASTA

XP_057768268.1
MADAYGNTRGGGLLRVSMCGGADADAQAREIEQLSREGSQYSLSTGILPSLGARSNRRVRLRPYIVSPYDRRYRAWQNFLVVLVVYTAWVSPFEFGFLDTPAKPLSVTDNIVNGFFFIDIVLTFFVAYLDRSTYLLVDNRKRIAKKYIFSWFLLDAISTIPSELARKILPKPLRTYGVFNMLRLWRLRRVGALFARLEKDKNFNYFWVRCAKLVCVTLFAVHCAGCFYYLLAAHYPNPDKTWIGAAIENFHDTSIWLRYV...

XP_057768269.1
MLRLWRLRRVGALFARLEKDKNFNYFWVRCAKLVCVTLFAVHCAGCFYYLLAAHYPNPDKTWIGAAIENFHDTSIWLRYVTSIYWSITTLTTVGYGDLHAENTREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSKTRQFRDTIQAASSFAQRNQLPARLQDQMLSHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHFLFYALVEKAYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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